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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
CDSIVVAYYFCGEPIPYRTLVRGRAVTLGQFKELLTKKGSYRYYFKKVSDEFDCGVVFEE
VREDEAILPVFEEKIIGKVEKVD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1wsp-a1-m1-cA 83 83 1.0000 1.0000 1.0000 3.33e-55 1wsp-a1-m1-cA_1wsp-a1-m1-cB
2 1wsp-a1-m1-cC 84 83 1.0000 0.9881 1.0000 4.23e-55 1wsp-a1-m1-cB_1wsp-a1-m1-cC
3 1wsp-a1-m1-cB 84 83 1.0000 0.9881 1.0000 4.23e-55 1wsp-a1-m1-cA_1wsp-a1-m1-cB, 1wsp-a1-m1-cB_1wsp-a1-m1-cC
4 5y3b-a1-m1-cG 82 56 0.2892 0.2927 0.4286 9.65e-08 5y3b-a1-m1-cD_5y3b-a1-m1-cG
5 5y3b-a1-m1-cA 82 56 0.2892 0.2927 0.4286 9.65e-08 5y3b-a1-m1-cB_5y3b-a1-m1-cA
6 5y3b-a1-m1-cD 81 56 0.2892 0.2963 0.4286 1.09e-07 5y3b-a1-m1-cD_5y3b-a1-m1-cG
7 5y3b-a1-m1-cB 81 56 0.2892 0.2963 0.4286 1.09e-07 5y3b-a1-m1-cB_5y3b-a1-m1-cA
8 6lez-a1-m1-cA 528 49 0.1807 0.0284 0.3061 0.008 6lez-a1-m1-cB_6lez-a1-m1-cA
9 6lez-a1-m1-cB 522 49 0.1807 0.0287 0.3061 0.008 6lez-a1-m1-cB_6lez-a1-m1-cA
10 6mvh-a1-m1-cD 305 34 0.1687 0.0459 0.4118 0.41 6mvh-a1-m1-cD_6mvh-a1-m1-cB, 6mvh-a1-m1-cD_6mvh-a1-m1-cC
11 5a98-a1-m3-cA 235 43 0.1566 0.0553 0.3023 0.58 5a98-a1-m2-cA_5a98-a1-m3-cA
12 5a98-a1-m2-cA 235 43 0.1566 0.0553 0.3023 0.58 5a98-a1-m2-cA_5a98-a1-m3-cA
13 6g6s-a1-m1-cA 95 46 0.1928 0.1684 0.3478 5.0 6g6s-a1-m1-cB_6g6s-a1-m1-cA
14 6g6s-a1-m1-cB 91 43 0.1807 0.1648 0.3488 5.1 6g6s-a1-m1-cB_6g6s-a1-m1-cA
15 1j0j-a1-m1-cB 588 44 0.1807 0.0255 0.3409 5.2 1j0j-a1-m1-cA_1j0j-a1-m1-cB
16 1j0j-a1-m1-cA 588 44 0.1807 0.0255 0.3409 5.2 1j0j-a1-m1-cA_1j0j-a1-m1-cB
17 5ca9-a1-m2-cA 656 37 0.1687 0.0213 0.3784 5.8 5ca9-a1-m1-cA_5ca9-a1-m2-cA
18 5ca9-a1-m1-cA 656 37 0.1687 0.0213 0.3784 5.8 5ca9-a1-m1-cA_5ca9-a1-m2-cA
19 6h2l-a1-m1-cA 190 30 0.1325 0.0579 0.3667 5.9 6h2l-a1-m1-cA_6h2l-a1-m1-cB
20 3hyw-a3-m1-cF 427 45 0.1687 0.0328 0.3111 8.9 3hyw-a3-m1-cE_3hyw-a3-m1-cF
21 3hyw-a3-m1-cE 427 45 0.1687 0.0328 0.3111 8.9 3hyw-a3-m1-cE_3hyw-a3-m1-cF
22 3hyx-a2-m1-cF 428 45 0.1687 0.0327 0.3111 8.9 3hyx-a2-m1-cB_3hyx-a2-m1-cF
23 3hyx-a2-m1-cB 428 45 0.1687 0.0327 0.3111 8.9 3hyx-a2-m1-cB_3hyx-a2-m1-cF

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Reference:
Jacob Schwartz et al.

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