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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=45)
CPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYRDLKWW

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1jl9-a1-m1-cB 45 45 1.0000 1.0000 1.0000 8.52e-29 1jl9-a1-m1-cA_1jl9-a1-m1-cB
2 1jl9-a1-m1-cA 42 42 0.9333 1.0000 1.0000 7.53e-26 1jl9-a1-m1-cA_1jl9-a1-m1-cB
3 4cud-a1-m2-cA 122 30 0.2444 0.0902 0.3667 0.22 4cud-a1-m1-cA_4cud-a1-m2-cA
4 4cud-a1-m2-cA 122 30 0.2889 0.1066 0.4333 0.45 4cud-a1-m1-cA_4cud-a1-m2-cA
5 4cud-a1-m1-cA 122 30 0.2444 0.0902 0.3667 0.22 4cud-a1-m1-cA_4cud-a1-m2-cA
6 4cud-a1-m1-cA 122 30 0.2889 0.1066 0.4333 0.45 4cud-a1-m1-cA_4cud-a1-m2-cA
7 4d0f-a1-m2-cA 125 30 0.2444 0.0880 0.3667 0.23 4d0f-a1-m1-cA_4d0f-a1-m2-cA
8 4d0f-a1-m2-cA 125 30 0.2889 0.1040 0.4333 0.47 4d0f-a1-m1-cA_4d0f-a1-m2-cA
9 4d0f-a1-m1-cA 125 30 0.2444 0.0880 0.3667 0.23 4d0f-a1-m1-cA_4d0f-a1-m2-cA
10 4d0f-a1-m1-cA 125 30 0.2889 0.1040 0.4333 0.47 4d0f-a1-m1-cA_4d0f-a1-m2-cA
11 1g1s-a1-m1-cB 157 35 0.2667 0.0764 0.3429 0.63 1g1s-a1-m1-cB_1g1s-a1-m1-cA
12 1g1s-a1-m1-cA 158 35 0.2667 0.0759 0.3429 0.63 1g1s-a1-m1-cB_1g1s-a1-m1-cA
13 1g1q-a1-m1-cC 159 35 0.2667 0.0755 0.3429 0.65 1g1q-a1-m1-cC_1g1q-a1-m1-cD
14 1g1q-a1-m1-cD 160 35 0.2667 0.0750 0.3429 0.70 1g1q-a1-m1-cA_1g1q-a1-m1-cD, 1g1q-a1-m1-cC_1g1q-a1-m1-cD
15 1g1q-a1-m1-cA 160 35 0.2667 0.0750 0.3429 0.70 1g1q-a1-m1-cA_1g1q-a1-m1-cD
16 8em4-a1-m1-cB 3818 30 0.2889 0.0034 0.4333 0.78 8em4-a1-m1-cA_8em4-a1-m1-cB
17 8em4-a1-m1-cA 3818 30 0.2889 0.0034 0.4333 0.78 8em4-a1-m1-cA_8em4-a1-m1-cB
18 8em7-a1-m1-cB 4378 30 0.2889 0.0030 0.4333 0.83 8em7-a1-m1-cA_8em7-a1-m1-cB
19 8em7-a1-m1-cA 4378 30 0.2889 0.0030 0.4333 0.83 8em7-a1-m1-cA_8em7-a1-m1-cB
20 2pgn-a1-m2-cB 587 27 0.2222 0.0170 0.3704 1.5 2pgn-a1-m1-cA_2pgn-a1-m2-cB, 2pgn-a1-m1-cB_2pgn-a1-m2-cB, 2pgn-a1-m2-cA_2pgn-a1-m2-cB
21 2pgn-a1-m2-cA 587 27 0.2222 0.0170 0.3704 1.5 2pgn-a1-m2-cA_2pgn-a1-m2-cB
22 2pgn-a1-m1-cB 587 27 0.2222 0.0170 0.3704 1.5 2pgn-a1-m1-cB_2pgn-a1-m2-cB
23 2pgn-a1-m1-cA 587 27 0.2222 0.0170 0.3704 1.5 2pgn-a1-m1-cA_2pgn-a1-m2-cB
24 4d90-a3-m1-cA 127 32 0.2444 0.0866 0.3438 3.5 4d90-a3-m1-cB_4d90-a3-m1-cA
25 7pgm-a1-m1-cA 447 33 0.2667 0.0268 0.3636 3.6 7pgm-a1-m1-cB_7pgm-a1-m1-cA, 7pgm-a1-m1-cC_7pgm-a1-m1-cA
26 4d90-a3-m1-cB 126 32 0.2444 0.0873 0.3438 3.8 4d90-a3-m1-cB_4d90-a3-m1-cA
27 4bjz-a1-m2-cA 395 38 0.3111 0.0354 0.3684 4.1 4bjz-a1-m1-cA_4bjz-a1-m2-cA
28 4bjz-a1-m1-cA 395 38 0.3111 0.0354 0.3684 4.1 4bjz-a1-m1-cA_4bjz-a1-m2-cA
29 7pgm-a1-m1-cB 427 33 0.2667 0.0281 0.3636 4.3 7pgm-a1-m1-cB_7pgm-a1-m1-cA
30 1c7n-a4-m1-cH 394 29 0.2667 0.0305 0.4138 8.8 1c7n-a4-m1-cG_1c7n-a4-m1-cH
31 1c7n-a4-m1-cG 394 29 0.2667 0.0305 0.4138 8.8 1c7n-a4-m1-cG_1c7n-a4-m1-cH

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Reference:
Jacob Schwartz et al.

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