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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
CPVEFTLDVIGGKWKGILFYHMIDGKKRFNEFRRICPSITQRMLTLQLRELEADGIVHRE
VYHQVPPKVEYSLTEFGRTLEPIVLQMKEWGESNRDV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4a5m-a3-m1-cF 97 97 1.0000 1.0000 1.0000 9.42e-70 4a5m-a3-m1-cE_4a5m-a3-m1-cF
2 4a5m-a3-m1-cE 96 96 0.9897 1.0000 1.0000 4.54e-69 4a5m-a3-m1-cE_4a5m-a3-m1-cF
3 7bze-a1-m2-cA 108 94 0.5670 0.5093 0.5851 4.87e-33 7bze-a1-m1-cA_7bze-a1-m2-cA
4 7bze-a1-m1-cA 108 94 0.5670 0.5093 0.5851 4.87e-33 7bze-a1-m1-cA_7bze-a1-m2-cA
5 7bzg-a3-m1-cJ 110 94 0.5670 0.5000 0.5851 1.31e-32 7bzg-a3-m1-cI_7bzg-a3-m1-cJ
6 7bzg-a3-m1-cI 110 94 0.5670 0.5000 0.5851 1.31e-32 7bzg-a3-m1-cI_7bzg-a3-m1-cJ
7 2hzt-a2-m1-cD 88 82 0.5155 0.5682 0.6098 2.93e-24 2hzt-a2-m1-cC_2hzt-a2-m1-cD
8 2hzt-a2-m1-cC 88 82 0.5155 0.5682 0.6098 2.93e-24 2hzt-a2-m1-cC_2hzt-a2-m1-cD
9 5hs7-a1-m1-cB 98 93 0.3711 0.3673 0.3871 2.10e-20 5hs7-a1-m1-cB_5hs7-a1-m1-cA
10 5hs7-a1-m1-cA 102 93 0.3711 0.3529 0.3871 3.07e-20 5hs7-a1-m1-cB_5hs7-a1-m1-cA
11 5hs8-a1-m2-cA 101 93 0.3711 0.3564 0.3871 3.08e-20 5hs8-a1-m1-cA_5hs8-a1-m2-cA
12 5hs8-a1-m1-cA 101 93 0.3711 0.3564 0.3871 3.08e-20 5hs8-a1-m1-cA_5hs8-a1-m2-cA
13 1z7u-a1-m1-cA 107 93 0.4021 0.3645 0.4194 9.52e-18 1z7u-a1-m1-cB_1z7u-a1-m1-cA
14 1z7u-a1-m1-cB 106 93 0.4021 0.3679 0.4194 1.01e-17 1z7u-a1-m1-cB_1z7u-a1-m1-cA
15 2fsw-a1-m1-cA 99 93 0.2990 0.2929 0.3118 1.04e-13 2fsw-a1-m1-cA_2fsw-a1-m1-cB
16 2fsw-a1-m1-cB 100 93 0.2990 0.2900 0.3118 1.12e-13 2fsw-a1-m1-cA_2fsw-a1-m1-cB
17 1yyv-a1-m1-cA 109 94 0.3299 0.2936 0.3404 4.53e-11 1yyv-a1-m1-cB_1yyv-a1-m1-cA
18 1yyv-a1-m1-cB 107 94 0.3299 0.2991 0.3404 4.63e-11 1yyv-a1-m1-cB_1yyv-a1-m1-cA
19 2f2e-a3-m3-cA 140 92 0.3299 0.2286 0.3478 5.64e-11 2f2e-a3-m3-cB_2f2e-a3-m3-cA
20 2f2e-a3-m3-cB 138 92 0.3299 0.2319 0.3478 5.92e-11 2f2e-a3-m1-cB_2f2e-a3-m3-cB, 2f2e-a3-m3-cB_2f2e-a3-m3-cA
21 2f2e-a3-m1-cB 138 92 0.3299 0.2319 0.3478 5.92e-11 2f2e-a3-m1-cB_2f2e-a3-m3-cB
22 2f2e-a2-m2-cB 138 92 0.3299 0.2319 0.3478 5.92e-11 2f2e-a2-m1-cB_2f2e-a2-m2-cB
23 2f2e-a2-m1-cB 138 92 0.3299 0.2319 0.3478 5.92e-11 2f2e-a2-m1-cB_2f2e-a2-m2-cB
24 4hqe-a1-m1-cA 105 101 0.2990 0.2762 0.2871 8.83e-11 4hqe-a1-m1-cA_4hqe-a1-m1-cB
25 4hqe-a1-m1-cB 108 101 0.2990 0.2685 0.2871 1.02e-10 4hqe-a1-m1-cA_4hqe-a1-m1-cB
26 4gcv-a2-m1-cD 136 94 0.3093 0.2206 0.3191 3.80e-05 4gcv-a2-m1-cC_4gcv-a2-m1-cD
27 4gcv-a2-m1-cC 136 94 0.3093 0.2206 0.3191 3.80e-05 4gcv-a2-m1-cC_4gcv-a2-m1-cD
28 3df8-a1-m2-cA 105 78 0.2371 0.2190 0.2949 0.017 3df8-a1-m1-cA_3df8-a1-m2-cA
29 3df8-a1-m1-cA 105 78 0.2371 0.2190 0.2949 0.017 3df8-a1-m1-cA_3df8-a1-m2-cA
30 1xes-a2-m1-cD 382 28 0.1237 0.0314 0.4286 0.30 1xes-a2-m1-cC_1xes-a2-m1-cD
31 3cjn-a1-m2-cA 139 46 0.1856 0.1295 0.3913 1.7 3cjn-a1-m1-cA_3cjn-a1-m2-cA
32 3cjn-a1-m1-cA 139 46 0.1856 0.1295 0.3913 1.7 3cjn-a1-m1-cA_3cjn-a1-m2-cA
33 3l9f-a2-m1-cC 170 41 0.1753 0.1000 0.4146 2.5 3l9f-a2-m1-cB_3l9f-a2-m1-cC
34 3l9f-a2-m1-cB 170 41 0.1753 0.1000 0.4146 2.5 3l9f-a2-m1-cB_3l9f-a2-m1-cC
35 5ib9-a1-m2-cA 412 23 0.1237 0.0291 0.5217 2.6 5ib9-a1-m1-cA_5ib9-a1-m2-cA
36 5ib9-a1-m1-cA 412 23 0.1237 0.0291 0.5217 2.6 5ib9-a1-m1-cA_5ib9-a1-m2-cA
37 3hi0-a1-m1-cB 483 106 0.2680 0.0538 0.2453 4.0 3hi0-a1-m1-cB_3hi0-a1-m1-cA
38 3ns6-a3-m1-cB 99 53 0.1649 0.1616 0.3019 4.8 3ns6-a3-m1-cA_3ns6-a3-m1-cB
39 3ns6-a3-m1-cA 99 53 0.1649 0.1616 0.3019 4.8 3ns6-a3-m1-cA_3ns6-a3-m1-cB
40 7uyx-a2-m1-cD 166 41 0.1031 0.0602 0.2439 5.9 7uyx-a2-m1-cC_7uyx-a2-m1-cD
41 3hi0-a1-m1-cA 491 107 0.2680 0.0530 0.2430 8.1 3hi0-a1-m1-cB_3hi0-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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