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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
CRCQCIKTYSKPFHPKFIKELRVIESGPCCANTEIIVKLSDGRELCLDPKENWVQRVVEK
FLKRAENS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1qe6-a3-m1-cD 72 68 1.0000 0.9444 1.0000 4.08e-46 1qe6-a3-m2-cB_1qe6-a3-m1-cD
2 1qe6-a3-m2-cB 71 68 1.0000 0.9577 1.0000 4.89e-46 1qe6-a3-m2-cA_1qe6-a3-m2-cB, 1qe6-a3-m2-cB_1qe6-a3-m1-cD
3 1qe6-a3-m2-cA 68 68 1.0000 1.0000 1.0000 5.66e-46 1qe6-a3-m2-cA_1qe6-a3-m2-cB
4 1rod-a1-m1-cB 72 61 0.7500 0.7083 0.8361 2.55e-33 1rod-a1-m1-cA_1rod-a1-m1-cB
5 1rod-a1-m1-cA 72 61 0.7500 0.7083 0.8361 2.55e-33 1rod-a1-m1-cA_1rod-a1-m1-cB
6 1msh-a1-m1-cB 72 61 0.3971 0.3750 0.4426 4.41e-14 1msh-a1-m1-cA_1msh-a1-m1-cB
7 1msh-a1-m1-cA 72 61 0.3971 0.3750 0.4426 4.41e-14 1msh-a1-m1-cA_1msh-a1-m1-cB
8 6wzk-a1-m1-cF 64 63 0.3971 0.4219 0.4286 9.52e-14 6wzk-a1-m1-cE_6wzk-a1-m1-cF
9 6wzk-a1-m1-cE 64 63 0.3971 0.4219 0.4286 9.52e-14 6wzk-a1-m1-cE_6wzk-a1-m1-cF
10 2mgs-a1-m1-cB 71 61 0.3529 0.3380 0.3934 3.37e-13 2mgs-a1-m1-cA_2mgs-a1-m1-cB
11 2mgs-a1-m1-cA 71 61 0.3529 0.3380 0.3934 3.37e-13 2mgs-a1-m1-cA_2mgs-a1-m1-cB
12 1tvx-a1-m1-cC 64 61 0.4265 0.4531 0.4754 3.87e-13 1tvx-a1-m1-cA_1tvx-a1-m1-cC, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
13 1tvx-a1-m1-cA 64 61 0.4265 0.4531 0.4754 3.87e-13 1tvx-a1-m1-cA_1tvx-a1-m1-cC
14 1tvx-a1-m1-cD 71 61 0.4265 0.4085 0.4754 4.34e-13 1tvx-a1-m1-cB_1tvx-a1-m1-cD, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
15 1tvx-a1-m1-cB 71 61 0.4265 0.4085 0.4754 4.34e-13 1tvx-a1-m1-cB_1tvx-a1-m1-cD
16 1mi2-a1-m1-cB 73 65 0.3971 0.3699 0.4154 7.20e-13 1mi2-a1-m1-cA_1mi2-a1-m1-cB
17 1mi2-a1-m1-cA 73 65 0.3971 0.3699 0.4154 7.20e-13 1mi2-a1-m1-cA_1mi2-a1-m1-cB
18 3n52-a3-m1-cB 71 65 0.3971 0.3803 0.4154 8.00e-13 3n52-a3-m1-cD_3n52-a3-m1-cB
19 3n52-a3-m1-cD 70 64 0.3971 0.3857 0.4219 8.71e-13 3n52-a3-m1-cC_3n52-a3-m1-cD, 3n52-a3-m1-cD_3n52-a3-m1-cB
20 3n52-a3-m1-cC 67 65 0.3971 0.4030 0.4154 8.95e-13 3n52-a3-m1-cC_3n52-a3-m1-cD
21 6wzj-a1-m1-cE 63 61 0.3676 0.3968 0.4098 1.35e-12 6wzj-a1-m1-cF_6wzj-a1-m1-cE
22 1pfn-a1-m1-cD 68 61 0.3529 0.3529 0.3934 5.11e-12 1pfn-a1-m1-cB_1pfn-a1-m1-cD
23 1pfn-a1-m1-cC 68 61 0.3529 0.3529 0.3934 5.11e-12 1pfn-a1-m1-cB_1pfn-a1-m1-cC
24 1pfn-a1-m1-cB 68 61 0.3529 0.3529 0.3934 5.11e-12 1pfn-a1-m1-cB_1pfn-a1-m1-cC, 1pfn-a1-m1-cB_1pfn-a1-m1-cD
25 6wzj-a1-m1-cF 59 61 0.3382 0.3898 0.3770 2.82e-10 6wzj-a1-m1-cF_6wzj-a1-m1-cE
26 1f9q-a1-m1-cC 62 61 0.3235 0.3548 0.3607 3.60e-10 1f9q-a1-m1-cB_1f9q-a1-m1-cC
27 1f9q-a1-m1-cB 62 61 0.3235 0.3548 0.3607 3.60e-10 1f9q-a1-m1-cB_1f9q-a1-m1-cC
28 4r9w-a1-m2-cA 62 61 0.3235 0.3548 0.3607 3.68e-10 4r9w-a1-m2-cA_4r9w-a1-m2-cB
29 4r9w-a1-m1-cA 62 61 0.3235 0.3548 0.3607 3.68e-10 4r9w-a1-m1-cA_4r9w-a1-m2-cB
30 4r9y-a1-m1-cD 65 61 0.3235 0.3385 0.3607 3.70e-10 4r9y-a1-m1-cB_4r9y-a1-m1-cD
31 4r9y-a1-m1-cB 65 61 0.3235 0.3385 0.3607 3.70e-10 4r9y-a1-m1-cB_4r9y-a1-m1-cD
32 4r9w-a1-m2-cB 64 61 0.3235 0.3438 0.3607 4.07e-10 4r9w-a1-m1-cA_4r9w-a1-m2-cB, 4r9w-a1-m2-cA_4r9w-a1-m2-cB
33 4hsv-a1-m1-cD 65 62 0.3088 0.3231 0.3387 3.71e-09 4hsv-a1-m1-cA_4hsv-a1-m1-cD, 4hsv-a1-m1-cC_4hsv-a1-m1-cD
34 4hsv-a1-m1-cA 65 62 0.3088 0.3231 0.3387 3.71e-09 4hsv-a1-m1-cA_4hsv-a1-m1-cD
35 4hsv-a1-m1-cC 59 58 0.2941 0.3390 0.3448 1.40e-08 4hsv-a1-m1-cC_4hsv-a1-m1-cD
36 1plf-a1-m1-cC 63 62 0.3088 0.3333 0.3387 3.36e-08 1plf-a1-m1-cA_1plf-a1-m1-cC, 1plf-a1-m1-cC_1plf-a1-m1-cD
37 1plf-a1-m1-cA 63 62 0.3088 0.3333 0.3387 3.36e-08 1plf-a1-m1-cA_1plf-a1-m1-cC, 1plf-a1-m1-cA_1plf-a1-m1-cD
38 1plf-a1-m1-cD 65 62 0.3088 0.3231 0.3387 4.10e-08 1plf-a1-m1-cA_1plf-a1-m1-cD, 1plf-a1-m1-cB_1plf-a1-m1-cD, 1plf-a1-m1-cC_1plf-a1-m1-cD
39 1plf-a1-m1-cB 65 62 0.3088 0.3231 0.3387 4.10e-08 1plf-a1-m1-cB_1plf-a1-m1-cD
40 1o7y-a1-m1-cD 62 59 0.2353 0.2581 0.2712 8.79e-05 1o7y-a1-m1-cD_1o7y-a1-m1-cC
41 1o7y-a1-m1-cC 63 59 0.2353 0.2540 0.2712 9.07e-05 1o7y-a1-m1-cB_1o7y-a1-m1-cC, 1o7y-a1-m1-cC_1o7y-a1-m1-cA, 1o7y-a1-m1-cD_1o7y-a1-m1-cC
42 1o7y-a1-m1-cA 67 59 0.2353 0.2388 0.2712 9.73e-05 1o7y-a1-m1-cC_1o7y-a1-m1-cA
43 4uai-a1-m1-cA 68 48 0.2500 0.2500 0.3542 2.75e-04 4uai-a1-m1-cB_4uai-a1-m1-cA
44 4uai-a1-m1-cB 67 48 0.2500 0.2537 0.3542 2.79e-04 4uai-a1-m1-cB_4uai-a1-m1-cA
45 3hp3-a3-m1-cD 64 46 0.2500 0.2656 0.3696 3.92e-04 3hp3-a3-m1-cD_3hp3-a3-m1-cF
46 3hp3-a3-m1-cF 65 46 0.2500 0.2615 0.3696 4.04e-04 3hp3-a3-m1-cD_3hp3-a3-m1-cF
47 1o7y-a1-m1-cB 62 62 0.2353 0.2581 0.2581 4.29e-04 1o7y-a1-m1-cB_1o7y-a1-m1-cC
48 2hci-a1-m1-cB 65 63 0.2500 0.2615 0.2698 7.83e-04 2hci-a1-m1-cB_2hci-a1-m1-cA
49 2hci-a1-m1-cA 68 63 0.2500 0.2500 0.2698 8.48e-04 2hci-a1-m1-cB_2hci-a1-m1-cA
50 4mhe-a2-m1-cB 69 46 0.2206 0.2174 0.3261 0.001 4mhe-a2-m1-cC_4mhe-a2-m1-cB
51 4mhe-a2-m1-cC 61 46 0.2206 0.2459 0.3261 0.001 4mhe-a2-m1-cC_4mhe-a2-m1-cB
52 2r3z-a1-m1-cA 68 61 0.2500 0.2500 0.2787 0.003 2r3z-a1-m1-cB_2r3z-a1-m1-cA, 2r3z-a1-m1-cD_2r3z-a1-m1-cA
53 2ra4-a4-m4-cB 65 30 0.1765 0.1846 0.4000 0.003 2ra4-a4-m2-cB_2ra4-a4-m4-cB
54 2ra4-a4-m2-cB 65 30 0.1765 0.1846 0.4000 0.003 2ra4-a4-m2-cB_2ra4-a4-m4-cB
55 2ra4-a2-m4-cB 65 30 0.1765 0.1846 0.4000 0.003 2ra4-a2-m4-cA_2ra4-a2-m4-cB
56 2ra4-a2-m4-cA 65 30 0.1765 0.1846 0.4000 0.003 2ra4-a2-m4-cA_2ra4-a2-m4-cB
57 7s5a-a1-m1-cB 76 26 0.1765 0.1579 0.4615 0.016 7s5a-a1-m1-cA_7s5a-a1-m1-cB
58 1esr-a1-m2-cA 75 26 0.1765 0.1600 0.4615 0.016 1esr-a1-m1-cA_1esr-a1-m2-cA
59 1esr-a1-m1-cA 75 26 0.1765 0.1600 0.4615 0.016 1esr-a1-m1-cA_1esr-a1-m2-cA
60 7s5a-a1-m1-cA 73 26 0.1765 0.1644 0.4615 0.016 7s5a-a1-m1-cA_7s5a-a1-m1-cB
61 2r3z-a1-m1-cD 64 59 0.2353 0.2500 0.2712 0.025 2r3z-a1-m1-cD_2r3z-a1-m1-cA
62 2r3z-a1-m1-cB 67 59 0.2353 0.2388 0.2712 0.030 2r3z-a1-m1-cB_2r3z-a1-m1-cA
63 1f2l-a1-m1-cD 70 41 0.1765 0.1714 0.2927 0.032 1f2l-a1-m1-cA_1f2l-a1-m1-cD, 1f2l-a1-m1-cC_1f2l-a1-m1-cD
64 5eki-a7-m1-cA 72 61 0.2647 0.2500 0.2951 0.048 5eki-a7-m1-cF_5eki-a7-m1-cA
65 5eki-a7-m1-cF 70 61 0.2647 0.2571 0.2951 0.049 5eki-a7-m1-cF_5eki-a7-m1-cA
66 1ncv-a1-m1-cB 76 38 0.1618 0.1447 0.2895 0.087 1ncv-a1-m1-cA_1ncv-a1-m1-cB
67 1ncv-a1-m1-cA 76 38 0.1618 0.1447 0.2895 0.087 1ncv-a1-m1-cA_1ncv-a1-m1-cB
68 1f2l-a1-m1-cC 64 37 0.1618 0.1719 0.2973 0.095 1f2l-a1-m1-cC_1f2l-a1-m1-cD
69 1f2l-a1-m1-cA 64 37 0.1618 0.1719 0.2973 0.095 1f2l-a1-m1-cA_1f2l-a1-m1-cD
70 4oij-a1-m1-cB 71 27 0.1765 0.1690 0.4444 0.20 4oij-a1-m1-cA_4oij-a1-m1-cB
71 4oij-a1-m1-cA 71 27 0.1765 0.1690 0.4444 0.20 4oij-a1-m1-cA_4oij-a1-m1-cB
72 2vxw-a1-m1-cD 62 57 0.2059 0.2258 0.2456 0.28 2vxw-a1-m1-cD_2vxw-a1-m1-cA, 2vxw-a1-m1-cD_2vxw-a1-m1-cB
73 6log-a1-m2-cA 63 57 0.2059 0.2222 0.2456 0.29 6log-a1-m1-cA_6log-a1-m2-cA
74 6log-a1-m1-cA 63 57 0.2059 0.2222 0.2456 0.29 6log-a1-m1-cA_6log-a1-m2-cA
75 6aez-a1-m3-cA 64 57 0.2059 0.2188 0.2456 0.36 6aez-a1-m2-cA_6aez-a1-m3-cA
76 6aez-a1-m2-cA 64 57 0.2059 0.2188 0.2456 0.36 6aez-a1-m2-cA_6aez-a1-m3-cA
77 2vxw-a1-m1-cB 69 57 0.2059 0.2029 0.2456 0.37 2vxw-a1-m1-cD_2vxw-a1-m1-cB
78 2vxw-a1-m1-cA 69 57 0.2059 0.2029 0.2456 0.37 2vxw-a1-m1-cD_2vxw-a1-m1-cA
79 5l2u-a2-m2-cI 65 57 0.2059 0.2154 0.2456 0.39 5l2u-a2-m2-cG_5l2u-a2-m2-cI
80 5dnf-a1-m1-cG 65 57 0.2059 0.2154 0.2456 0.39 5dnf-a1-m1-cE_5dnf-a1-m1-cG
81 5dnf-a1-m1-cE 65 57 0.2059 0.2154 0.2456 0.39 5dnf-a1-m1-cE_5dnf-a1-m1-cG
82 5dnf-a1-m1-cD 65 57 0.2059 0.2154 0.2456 0.39 5dnf-a1-m1-cA_5dnf-a1-m1-cD
83 5dnf-a1-m1-cA 65 57 0.2059 0.2154 0.2456 0.39 5dnf-a1-m1-cA_5dnf-a1-m1-cD
84 5l2u-a2-m2-cH 64 57 0.2059 0.2188 0.2456 0.39 5l2u-a2-m2-cG_5l2u-a2-m2-cH
85 5l2u-a2-m2-cG 64 57 0.2059 0.2188 0.2456 0.39 5l2u-a2-m2-cG_5l2u-a2-m2-cH, 5l2u-a2-m2-cG_5l2u-a2-m2-cI
86 2l9h-a1-m1-cC 67 57 0.2059 0.2090 0.2456 0.45 2l9h-a1-m1-cA_2l9h-a1-m1-cC
87 2l9h-a1-m1-cA 67 57 0.2059 0.2090 0.2456 0.45 2l9h-a1-m1-cA_2l9h-a1-m1-cC
88 1hrj-a1-m1-cB 68 57 0.2059 0.2059 0.2456 0.46 1hrj-a1-m1-cA_1hrj-a1-m1-cB
89 1hrj-a1-m1-cA 68 57 0.2059 0.2059 0.2456 0.46 1hrj-a1-m1-cA_1hrj-a1-m1-cB
90 5yam-a1-m1-cB 69 29 0.1176 0.1159 0.2759 0.47 5yam-a1-m1-cA_5yam-a1-m1-cB
91 5yam-a1-m1-cA 69 29 0.1176 0.1159 0.2759 0.47 5yam-a1-m1-cA_5yam-a1-m1-cB
92 2fj2-a2-m1-cC 68 32 0.1176 0.1176 0.2500 0.58 2fj2-a2-m1-cD_2fj2-a2-m1-cC
93 2fj2-a2-m1-cD 67 32 0.1176 0.1194 0.2500 0.60 2fj2-a2-m1-cD_2fj2-a2-m1-cC
94 5ltl-a1-m1-cA 67 55 0.2206 0.2239 0.2727 0.94 5ltl-a1-m1-cA_5ltl-a1-m1-cB
95 5ltl-a1-m1-cB 68 55 0.2206 0.2206 0.2727 1.0 5ltl-a1-m1-cA_5ltl-a1-m1-cB
96 1ym5-a1-m2-cA 294 50 0.2353 0.0544 0.3200 2.0 1ym5-a1-m1-cA_1ym5-a1-m2-cA
97 1ym5-a1-m1-cA 294 50 0.2353 0.0544 0.3200 2.0 1ym5-a1-m1-cA_1ym5-a1-m2-cA
98 1nr4-a5-m3-cF 66 39 0.1912 0.1970 0.3333 6.7 1nr4-a5-m3-cF_1nr4-a5-m3-cE
99 1nr4-a5-m3-cE 69 39 0.1912 0.1884 0.3333 7.2 1nr4-a5-m1-cA_1nr4-a5-m3-cE, 1nr4-a5-m3-cF_1nr4-a5-m3-cE, 1nr4-a5-m4-cG_1nr4-a5-m3-cE
100 2jp1-a1-m1-cB 60 17 0.1176 0.1333 0.4706 8.4 2jp1-a1-m1-cA_2jp1-a1-m1-cB
101 2jp1-a1-m1-cA 60 17 0.1176 0.1333 0.4706 8.4 2jp1-a1-m1-cA_2jp1-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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