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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
CSFESLVDQRIKEALSRQEPKTISCTSVTSSGRLASCPAGMVVTGCACGYGCGSWDIRNG
NTCHCQCSVMDWASARCCRMA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1rh7-a3-m1-cC 81 81 1.0000 1.0000 1.0000 2.79e-55 1rh7-a3-m1-cB_1rh7-a3-m1-cC
2 1rh7-a3-m1-cB 81 81 1.0000 1.0000 1.0000 2.79e-55 1rh7-a3-m1-cB_1rh7-a3-m1-cC
3 1rgx-a2-m2-cB 89 85 0.4691 0.4270 0.4471 1.65e-23 1rgx-a2-m2-cA_1rgx-a2-m2-cB
4 1rgx-a2-m2-cA 89 85 0.4691 0.4270 0.4471 1.65e-23 1rgx-a2-m2-cA_1rgx-a2-m2-cB
5 1rgx-a2-m1-cB 89 85 0.4691 0.4270 0.4471 1.65e-23 1rgx-a2-m1-cB_1rgx-a2-m2-cC
6 1rgx-a2-m1-cA 89 85 0.4691 0.4270 0.4471 1.65e-23 1rgx-a2-m1-cA_1rgx-a2-m2-cC
7 1rfx-a3-m4-cA 89 85 0.4691 0.4270 0.4471 1.65e-23 1rfx-a3-m1-cB_1rfx-a3-m4-cA
8 1rfx-a3-m2-cC 89 85 0.4691 0.4270 0.4471 1.65e-23 1rfx-a3-m1-cB_1rfx-a3-m2-cC, 1rfx-a3-m2-cB_1rfx-a3-m2-cC
9 1rfx-a3-m2-cB 89 85 0.4691 0.4270 0.4471 1.65e-23 1rfx-a3-m1-cB_1rfx-a3-m2-cB, 1rfx-a3-m2-cB_1rfx-a3-m2-cC
10 1rfx-a3-m1-cB 89 85 0.4691 0.4270 0.4471 1.65e-23 1rfx-a3-m1-cB_1rfx-a3-m2-cB, 1rfx-a3-m1-cB_1rfx-a3-m2-cC, 1rfx-a3-m1-cB_1rfx-a3-m4-cA
11 1rgx-a2-m2-cC 94 85 0.4691 0.4043 0.4471 1.68e-23 1rgx-a2-m1-cA_1rgx-a2-m2-cC, 1rgx-a2-m1-cB_1rgx-a2-m2-cC
12 2w1o-a1-m1-cB 70 33 0.1481 0.1714 0.3636 0.91 2w1o-a1-m1-cA_2w1o-a1-m1-cB
13 2w1o-a1-m1-cA 70 33 0.1481 0.1714 0.3636 0.91 2w1o-a1-m1-cA_2w1o-a1-m1-cB
14 3aff-a1-m4-cB 364 57 0.2469 0.0549 0.3509 3.7 3aff-a1-m4-cB_3aff-a1-m3-cA, 3aff-a1-m4-cB_3aff-a1-m4-cA
15 3aff-a1-m4-cA 366 57 0.2469 0.0546 0.3509 3.7 3aff-a1-m2-cA_3aff-a1-m4-cA, 3aff-a1-m4-cB_3aff-a1-m4-cA
16 3aff-a1-m3-cA 366 57 0.2469 0.0546 0.3509 3.7 3aff-a1-m4-cB_3aff-a1-m3-cA
17 3aff-a1-m2-cA 366 57 0.2469 0.0546 0.3509 3.7 3aff-a1-m2-cA_3aff-a1-m4-cA
18 3afe-a1-m1-cD 379 57 0.2469 0.0528 0.3509 3.7 3afe-a1-m1-cD_3afe-a1-m1-cC
19 3afe-a1-m1-cC 381 57 0.2469 0.0525 0.3509 3.7 3afe-a1-m1-cD_3afe-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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