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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
CSQFLRGQECVEECRVLQGLPREYVNARHCLPCHPECQPQDGSVTCFGPEADQCVACAHY
KDPPFCVARC

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4hrn-a1-m1-cD 70 70 1.0000 1.0000 1.0000 1.56e-46 4hrn-a1-m1-cD_4hrn-a1-m1-cC
2 4hrn-a1-m1-cC 71 70 1.0000 0.9859 1.0000 1.94e-46 4hrn-a1-m1-cD_4hrn-a1-m1-cC
3 3n85-a1-m3-cA 605 70 0.9857 0.1140 0.9857 4.40e-43 3n85-a1-m2-cA_3n85-a1-m3-cA
4 3n85-a1-m3-cA 605 38 0.1714 0.0198 0.3158 9.2 3n85-a1-m2-cA_3n85-a1-m3-cA
5 3n85-a1-m2-cA 605 70 0.9857 0.1140 0.9857 4.40e-43 3n85-a1-m2-cA_3n85-a1-m3-cA
6 3n85-a1-m2-cA 605 38 0.1714 0.0198 0.3158 9.2 3n85-a1-m2-cA_3n85-a1-m3-cA
7 6kbi-a1-m1-cA 550 70 0.4714 0.0600 0.4714 7.83e-18 6kbi-a1-m1-cA_6kbi-a1-m2-cB
8 6kbi-a1-m1-cA 550 66 0.2714 0.0345 0.2879 0.042 6kbi-a1-m1-cA_6kbi-a1-m2-cB
9 6kbi-a1-m1-cA 550 38 0.2286 0.0291 0.4211 0.10 6kbi-a1-m1-cA_6kbi-a1-m2-cB
10 6kbi-a1-m2-cB 588 70 0.4714 0.0561 0.4714 8.67e-18 6kbi-a1-m1-cA_6kbi-a1-m2-cB
11 6kbi-a1-m2-cB 588 66 0.2714 0.0323 0.2879 0.046 6kbi-a1-m1-cA_6kbi-a1-m2-cB
12 6kbi-a1-m2-cB 588 38 0.2286 0.0272 0.4211 0.10 6kbi-a1-m1-cA_6kbi-a1-m2-cB
13 2ahx-a3-m2-cB 615 71 0.4429 0.0504 0.4366 1.00e-14 2ahx-a3-m1-cB_2ahx-a3-m2-cB
14 2ahx-a3-m2-cB 615 60 0.3286 0.0374 0.3833 0.16 2ahx-a3-m1-cB_2ahx-a3-m2-cB
15 2ahx-a3-m2-cB 615 38 0.2000 0.0228 0.3684 1.1 2ahx-a3-m1-cB_2ahx-a3-m2-cB
16 2ahx-a3-m2-cB 615 49 0.2000 0.0228 0.2857 4.2 2ahx-a3-m1-cB_2ahx-a3-m2-cB
17 2ahx-a3-m1-cB 615 71 0.4429 0.0504 0.4366 1.00e-14 2ahx-a3-m1-cB_2ahx-a3-m2-cB
18 2ahx-a3-m1-cB 615 60 0.3286 0.0374 0.3833 0.16 2ahx-a3-m1-cB_2ahx-a3-m2-cB
19 2ahx-a3-m1-cB 615 38 0.2000 0.0228 0.3684 1.1 2ahx-a3-m1-cB_2ahx-a3-m2-cB
20 2ahx-a3-m1-cB 615 49 0.2000 0.0228 0.2857 4.2 2ahx-a3-m1-cB_2ahx-a3-m2-cB
21 7v3p-a1-m1-cA 807 39 0.2429 0.0211 0.4359 0.013 7v3p-a1-m1-cA_7v3p-a1-m1-cB
22 5u8r-a1-m2-cA 801 39 0.2429 0.0212 0.4359 0.014 5u8r-a1-m1-cA_5u8r-a1-m2-cA
23 5u8r-a1-m1-cA 801 39 0.2429 0.0212 0.4359 0.014 5u8r-a1-m1-cA_5u8r-a1-m2-cA
24 7u23-a1-m1-cF 669 39 0.2429 0.0254 0.4359 0.019 7u23-a1-m1-cE_7u23-a1-m1-cF
25 7u23-a1-m1-cE 669 39 0.2429 0.0254 0.4359 0.019 7u23-a1-m1-cE_7u23-a1-m1-cF
26 7v3p-a1-m1-cB 816 39 0.2429 0.0208 0.4359 0.019 7v3p-a1-m1-cA_7v3p-a1-m1-cB
27 7xlc-a1-m1-cA 828 39 0.2429 0.0205 0.4359 0.023 7xlc-a1-m1-cA_7xlc-a1-m1-cB
28 7xgd-a1-m1-cB 836 39 0.2429 0.0203 0.4359 0.023 7xgd-a1-m1-cA_7xgd-a1-m1-cB
29 7xgd-a1-m1-cA 836 39 0.2429 0.0203 0.4359 0.023 7xgd-a1-m1-cA_7xgd-a1-m1-cB
30 7xlc-a1-m1-cB 829 39 0.2429 0.0205 0.4359 0.023 7xlc-a1-m1-cA_7xlc-a1-m1-cB
31 8eyr-a1-m1-cB 794 39 0.2286 0.0202 0.4103 0.073 8eyr-a1-m1-cB_8eyr-a1-m1-cA
32 8eyr-a1-m1-cA 795 39 0.2286 0.0201 0.4103 0.074 8eyr-a1-m1-cB_8eyr-a1-m1-cA
33 3ltf-a1-m1-cC 531 54 0.2429 0.0320 0.3148 1.7 3ltf-a1-m1-cA_3ltf-a1-m1-cC
34 3ltf-a1-m1-cC 531 25 0.1286 0.0169 0.3600 9.0 3ltf-a1-m1-cA_3ltf-a1-m1-cC
35 7zsl-a2-m1-cF 270 31 0.2000 0.0519 0.4516 7.0 7zsl-a2-m1-cF_7zsl-a2-m1-cD
36 7zsl-a2-m1-cD 271 31 0.2000 0.0517 0.4516 7.0 7zsl-a2-m1-cF_7zsl-a2-m1-cD
37 4jak-a1-m1-cB 155 20 0.1286 0.0581 0.4500 8.3 4jak-a1-m1-cA_4jak-a1-m1-cB
38 4jak-a1-m1-cA 155 20 0.1286 0.0581 0.4500 8.3 4jak-a1-m1-cA_4jak-a1-m1-cB
39 3ltf-a1-m1-cA 522 25 0.1286 0.0172 0.3600 8.7 3ltf-a1-m1-cA_3ltf-a1-m1-cC
40 3i2t-a1-m2-cA 542 25 0.1286 0.0166 0.3600 8.8 3i2t-a1-m1-cA_3i2t-a1-m2-cA
41 3i2t-a1-m1-cA 542 25 0.1286 0.0166 0.3600 8.8 3i2t-a1-m1-cA_3i2t-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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