Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=71)
CSQFLRGQECVEECRVLQGLPREYVNARHCLPCHPECQPQDGSVTCFGPEADQCVACAHY
KDPPFCVARCP

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 4hrn-a1-m1-cC 71 71 1.0000 1.0000 1.0000 3.89e-47 4hrn-a1-m1-cD_4hrn-a1-m1-cC
2 4hrn-a1-m1-cD 70 70 0.9859 1.0000 1.0000 1.96e-46 4hrn-a1-m1-cD_4hrn-a1-m1-cC
3 3n85-a1-m3-cA 605 71 0.9859 0.1157 0.9859 8.27e-44 3n85-a1-m2-cA_3n85-a1-m3-cA
4 3n85-a1-m3-cA 605 39 0.1831 0.0215 0.3333 1.2 3n85-a1-m2-cA_3n85-a1-m3-cA
5 3n85-a1-m2-cA 605 71 0.9859 0.1157 0.9859 8.27e-44 3n85-a1-m2-cA_3n85-a1-m3-cA
6 3n85-a1-m2-cA 605 39 0.1831 0.0215 0.3333 1.2 3n85-a1-m2-cA_3n85-a1-m3-cA
7 6kbi-a1-m1-cA 550 71 0.4789 0.0618 0.4789 1.02e-18 6kbi-a1-m1-cA_6kbi-a1-m2-cB
8 6kbi-a1-m1-cA 550 39 0.2394 0.0309 0.4359 0.014 6kbi-a1-m1-cA_6kbi-a1-m2-cB
9 6kbi-a1-m1-cA 550 66 0.2676 0.0345 0.2879 0.041 6kbi-a1-m1-cA_6kbi-a1-m2-cB
10 6kbi-a1-m2-cB 588 71 0.4789 0.0578 0.4789 1.26e-18 6kbi-a1-m1-cA_6kbi-a1-m2-cB
11 6kbi-a1-m2-cB 588 39 0.2394 0.0289 0.4359 0.014 6kbi-a1-m1-cA_6kbi-a1-m2-cB
12 6kbi-a1-m2-cB 588 66 0.2676 0.0323 0.2879 0.043 6kbi-a1-m1-cA_6kbi-a1-m2-cB
13 2ahx-a3-m2-cB 615 72 0.4507 0.0520 0.4444 1.56e-15 2ahx-a3-m1-cB_2ahx-a3-m2-cB
14 2ahx-a3-m2-cB 615 39 0.2113 0.0244 0.3846 0.14 2ahx-a3-m1-cB_2ahx-a3-m2-cB
15 2ahx-a3-m2-cB 615 60 0.3239 0.0374 0.3833 0.21 2ahx-a3-m1-cB_2ahx-a3-m2-cB
16 2ahx-a3-m2-cB 615 49 0.1972 0.0228 0.2857 4.2 2ahx-a3-m1-cB_2ahx-a3-m2-cB
17 2ahx-a3-m1-cB 615 72 0.4507 0.0520 0.4444 1.56e-15 2ahx-a3-m1-cB_2ahx-a3-m2-cB
18 2ahx-a3-m1-cB 615 39 0.2113 0.0244 0.3846 0.14 2ahx-a3-m1-cB_2ahx-a3-m2-cB
19 2ahx-a3-m1-cB 615 60 0.3239 0.0374 0.3833 0.21 2ahx-a3-m1-cB_2ahx-a3-m2-cB
20 2ahx-a3-m1-cB 615 49 0.1972 0.0228 0.2857 4.2 2ahx-a3-m1-cB_2ahx-a3-m2-cB
21 7v3p-a1-m1-cA 807 40 0.2535 0.0223 0.4500 0.002 7v3p-a1-m1-cA_7v3p-a1-m1-cB
22 5u8r-a1-m2-cA 801 40 0.2535 0.0225 0.4500 0.002 5u8r-a1-m1-cA_5u8r-a1-m2-cA
23 5u8r-a1-m1-cA 801 40 0.2535 0.0225 0.4500 0.002 5u8r-a1-m1-cA_5u8r-a1-m2-cA
24 7u23-a1-m1-cF 669 40 0.2535 0.0269 0.4500 0.002 7u23-a1-m1-cE_7u23-a1-m1-cF
25 7u23-a1-m1-cE 669 40 0.2535 0.0269 0.4500 0.002 7u23-a1-m1-cE_7u23-a1-m1-cF
26 7v3p-a1-m1-cB 816 40 0.2535 0.0221 0.4500 0.002 7v3p-a1-m1-cA_7v3p-a1-m1-cB
27 7xlc-a1-m1-cA 828 40 0.2535 0.0217 0.4500 0.003 7xlc-a1-m1-cA_7xlc-a1-m1-cB
28 7xlc-a1-m1-cB 829 40 0.2535 0.0217 0.4500 0.003 7xlc-a1-m1-cA_7xlc-a1-m1-cB
29 7xgd-a1-m1-cB 836 40 0.2535 0.0215 0.4500 0.003 7xgd-a1-m1-cA_7xgd-a1-m1-cB
30 7xgd-a1-m1-cA 836 40 0.2535 0.0215 0.4500 0.003 7xgd-a1-m1-cA_7xgd-a1-m1-cB
31 8eyr-a1-m1-cB 794 40 0.2394 0.0214 0.4250 0.008 8eyr-a1-m1-cB_8eyr-a1-m1-cA
32 8eyr-a1-m1-cA 795 40 0.2394 0.0214 0.4250 0.008 8eyr-a1-m1-cB_8eyr-a1-m1-cA
33 3ltf-a1-m1-cC 531 54 0.2394 0.0320 0.3148 1.4 3ltf-a1-m1-cA_3ltf-a1-m1-cC
34 3ltf-a1-m1-cC 531 26 0.1408 0.0188 0.3846 4.9 3ltf-a1-m1-cA_3ltf-a1-m1-cC
35 3ltf-a1-m1-cC 531 49 0.1972 0.0264 0.2857 7.4 3ltf-a1-m1-cA_3ltf-a1-m1-cC
36 7md4-a1-m1-cA 724 46 0.2254 0.0221 0.3478 3.8 7md4-a1-m1-cA_7md4-a1-m1-cB
37 3i2t-a1-m2-cA 542 26 0.1408 0.0185 0.3846 5.0 3i2t-a1-m1-cA_3i2t-a1-m2-cA
38 3i2t-a1-m2-cA 542 25 0.1268 0.0166 0.3600 7.8 3i2t-a1-m1-cA_3i2t-a1-m2-cA
39 3i2t-a1-m2-cA 542 59 0.2535 0.0332 0.3051 8.6 3i2t-a1-m1-cA_3i2t-a1-m2-cA
40 3i2t-a1-m1-cA 542 26 0.1408 0.0185 0.3846 5.0 3i2t-a1-m1-cA_3i2t-a1-m2-cA
41 3i2t-a1-m1-cA 542 25 0.1268 0.0166 0.3600 7.8 3i2t-a1-m1-cA_3i2t-a1-m2-cA
42 3i2t-a1-m1-cA 542 59 0.2535 0.0332 0.3051 8.6 3i2t-a1-m1-cA_3i2t-a1-m2-cA
43 3ltf-a1-m1-cA 522 26 0.1408 0.0192 0.3846 5.4 3ltf-a1-m1-cA_3ltf-a1-m1-cC
44 3ltf-a1-m1-cA 522 25 0.1268 0.0172 0.3600 8.2 3ltf-a1-m1-cA_3ltf-a1-m1-cC
45 7zsl-a2-m1-cF 270 31 0.1972 0.0519 0.4516 7.2 7zsl-a2-m1-cF_7zsl-a2-m1-cD
46 7zsl-a2-m1-cD 271 31 0.1972 0.0517 0.4516 7.2 7zsl-a2-m1-cF_7zsl-a2-m1-cD
47 7mqs-a1-m1-cF 811 46 0.2254 0.0197 0.3478 7.3 7mqs-a1-m1-cE_7mqs-a1-m1-cF
48 4jak-a1-m1-cB 155 20 0.1268 0.0581 0.4500 8.2 4jak-a1-m1-cA_4jak-a1-m1-cB
49 4jak-a1-m1-cA 155 20 0.1268 0.0581 0.4500 8.2 4jak-a1-m1-cA_4jak-a1-m1-cB
50 7md5-a1-m1-cA 682 46 0.2254 0.0235 0.3478 9.9 7md5-a1-m1-cB_7md5-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600