Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
CTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATMKKKGEKRCLNPESKAIKNLLKAV
SK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1o7y-a1-m1-cB 62 62 1.0000 1.0000 1.0000 7.43e-39 1o7y-a1-m1-cB_1o7y-a1-m1-cC
2 1o7y-a1-m1-cA 67 61 0.9839 0.9104 1.0000 2.07e-38 1o7y-a1-m1-cC_1o7y-a1-m1-cA
3 1o7y-a1-m1-cC 63 61 0.9839 0.9683 1.0000 2.98e-38 1o7y-a1-m1-cB_1o7y-a1-m1-cC, 1o7y-a1-m1-cC_1o7y-a1-m1-cA, 1o7y-a1-m1-cD_1o7y-a1-m1-cC
4 1o7y-a1-m1-cD 62 61 0.9839 0.9839 1.0000 3.00e-38 1o7y-a1-m1-cD_1o7y-a1-m1-cC
5 2r3z-a1-m1-cD 64 59 0.6774 0.6562 0.7119 4.89e-24 2r3z-a1-m1-cD_2r3z-a1-m1-cA
6 2r3z-a1-m1-cB 67 59 0.6774 0.6269 0.7119 6.81e-24 2r3z-a1-m1-cB_2r3z-a1-m1-cA
7 2r3z-a1-m1-cA 68 59 0.6774 0.6176 0.7119 7.46e-24 2r3z-a1-m1-cB_2r3z-a1-m1-cA, 2r3z-a1-m1-cD_2r3z-a1-m1-cA
8 1tvx-a1-m1-cC 64 58 0.3387 0.3281 0.3621 1.27e-07 1tvx-a1-m1-cA_1tvx-a1-m1-cC, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
9 1tvx-a1-m1-cA 64 58 0.3387 0.3281 0.3621 1.27e-07 1tvx-a1-m1-cA_1tvx-a1-m1-cC
10 1tvx-a1-m1-cD 71 58 0.3387 0.2958 0.3621 1.28e-07 1tvx-a1-m1-cB_1tvx-a1-m1-cD, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
11 1tvx-a1-m1-cB 71 58 0.3387 0.2958 0.3621 1.28e-07 1tvx-a1-m1-cB_1tvx-a1-m1-cD
12 4hsv-a1-m1-cC 59 58 0.3548 0.3729 0.3793 5.13e-07 4hsv-a1-m1-cC_4hsv-a1-m1-cD
13 4hsv-a1-m1-cD 65 58 0.3548 0.3385 0.3793 5.84e-07 4hsv-a1-m1-cA_4hsv-a1-m1-cD, 4hsv-a1-m1-cC_4hsv-a1-m1-cD
14 4hsv-a1-m1-cA 65 58 0.3548 0.3385 0.3793 5.84e-07 4hsv-a1-m1-cA_4hsv-a1-m1-cD
15 4r9y-a1-m1-cD 65 58 0.3548 0.3385 0.3793 6.04e-07 4r9y-a1-m1-cB_4r9y-a1-m1-cD
16 4r9y-a1-m1-cB 65 58 0.3548 0.3385 0.3793 6.04e-07 4r9y-a1-m1-cB_4r9y-a1-m1-cD
17 1f9q-a1-m1-cC 62 58 0.3548 0.3548 0.3793 6.11e-07 1f9q-a1-m1-cB_1f9q-a1-m1-cC
18 1f9q-a1-m1-cB 62 58 0.3548 0.3548 0.3793 6.11e-07 1f9q-a1-m1-cB_1f9q-a1-m1-cC
19 4r9w-a1-m2-cA 62 58 0.3548 0.3548 0.3793 6.18e-07 4r9w-a1-m2-cA_4r9w-a1-m2-cB
20 4r9w-a1-m1-cA 62 58 0.3548 0.3548 0.3793 6.18e-07 4r9w-a1-m1-cA_4r9w-a1-m2-cB
21 4r9w-a1-m2-cB 64 58 0.3548 0.3438 0.3793 6.59e-07 4r9w-a1-m1-cA_4r9w-a1-m2-cB, 4r9w-a1-m2-cA_4r9w-a1-m2-cB
22 1pfn-a1-m1-cD 68 58 0.3548 0.3235 0.3793 6.95e-07 1pfn-a1-m1-cB_1pfn-a1-m1-cD
23 1pfn-a1-m1-cC 68 58 0.3548 0.3235 0.3793 6.95e-07 1pfn-a1-m1-cB_1pfn-a1-m1-cC
24 1pfn-a1-m1-cB 68 58 0.3548 0.3235 0.3793 6.95e-07 1pfn-a1-m1-cB_1pfn-a1-m1-cC, 1pfn-a1-m1-cB_1pfn-a1-m1-cD
25 1plf-a1-m1-cC 63 63 0.4032 0.3968 0.3968 7.35e-07 1plf-a1-m1-cA_1plf-a1-m1-cC, 1plf-a1-m1-cC_1plf-a1-m1-cD
26 1plf-a1-m1-cA 63 63 0.4032 0.3968 0.3968 7.35e-07 1plf-a1-m1-cA_1plf-a1-m1-cC, 1plf-a1-m1-cA_1plf-a1-m1-cD
27 1plf-a1-m1-cD 65 63 0.4032 0.3846 0.3968 8.47e-07 1plf-a1-m1-cA_1plf-a1-m1-cD, 1plf-a1-m1-cB_1plf-a1-m1-cD, 1plf-a1-m1-cC_1plf-a1-m1-cD
28 1plf-a1-m1-cB 65 63 0.4032 0.3846 0.3968 8.47e-07 1plf-a1-m1-cB_1plf-a1-m1-cD
29 2mgs-a1-m1-cB 71 60 0.2742 0.2394 0.2833 3.27e-05 2mgs-a1-m1-cA_2mgs-a1-m1-cB
30 2mgs-a1-m1-cA 71 60 0.2742 0.2394 0.2833 3.27e-05 2mgs-a1-m1-cA_2mgs-a1-m1-cB
31 1rod-a1-m1-cB 72 58 0.2742 0.2361 0.2931 4.15e-05 1rod-a1-m1-cA_1rod-a1-m1-cB
32 1rod-a1-m1-cA 72 58 0.2742 0.2361 0.2931 4.15e-05 1rod-a1-m1-cA_1rod-a1-m1-cB
33 3n52-a3-m1-cD 70 50 0.2419 0.2143 0.3000 1.00e-04 3n52-a3-m1-cC_3n52-a3-m1-cD, 3n52-a3-m1-cD_3n52-a3-m1-cB
34 3n52-a3-m1-cC 67 50 0.2419 0.2239 0.3000 1.04e-04 3n52-a3-m1-cC_3n52-a3-m1-cD
35 1msh-a1-m1-cB 72 58 0.2903 0.2500 0.3103 1.05e-04 1msh-a1-m1-cA_1msh-a1-m1-cB
36 1msh-a1-m1-cA 72 58 0.2903 0.2500 0.3103 1.05e-04 1msh-a1-m1-cA_1msh-a1-m1-cB
37 3n52-a3-m1-cB 71 50 0.2419 0.2113 0.3000 1.08e-04 3n52-a3-m1-cD_3n52-a3-m1-cB
38 1mi2-a1-m1-cB 73 50 0.2419 0.2055 0.3000 1.13e-04 1mi2-a1-m1-cA_1mi2-a1-m1-cB
39 1mi2-a1-m1-cA 73 50 0.2419 0.2055 0.3000 1.13e-04 1mi2-a1-m1-cA_1mi2-a1-m1-cB
40 6wzj-a1-m1-cE 63 57 0.2742 0.2698 0.2982 1.17e-04 6wzj-a1-m1-cF_6wzj-a1-m1-cE
41 6wzk-a1-m1-cF 64 60 0.2742 0.2656 0.2833 3.11e-04 6wzk-a1-m1-cE_6wzk-a1-m1-cF
42 6wzk-a1-m1-cE 64 60 0.2742 0.2656 0.2833 3.11e-04 6wzk-a1-m1-cE_6wzk-a1-m1-cF
43 1qe6-a3-m2-cA 68 62 0.2581 0.2353 0.2581 3.91e-04 1qe6-a3-m2-cA_1qe6-a3-m2-cB
44 1qe6-a3-m1-cD 72 62 0.2581 0.2222 0.2581 4.51e-04 1qe6-a3-m2-cB_1qe6-a3-m1-cD
45 1qe6-a3-m2-cB 71 62 0.2581 0.2254 0.2581 4.77e-04 1qe6-a3-m2-cA_1qe6-a3-m2-cB, 1qe6-a3-m2-cB_1qe6-a3-m1-cD
46 6wzj-a1-m1-cF 59 57 0.2742 0.2881 0.2982 0.007 6wzj-a1-m1-cF_6wzj-a1-m1-cE
47 2n54-a1-m1-cB 66 61 0.1935 0.1818 0.1967 0.32 2n54-a1-m1-cA_2n54-a1-m1-cB
48 2n54-a1-m1-cA 66 61 0.1935 0.1818 0.1967 0.32 2n54-a1-m1-cA_2n54-a1-m1-cB
49 7tkv-a1-m1-cA 631 29 0.1774 0.0174 0.3793 1.8 7tkv-a1-m1-cB_7tkv-a1-m1-cA
50 2q8r-a2-m1-cG 63 27 0.1290 0.1270 0.2963 3.8 2q8r-a2-m1-cF_2q8r-a2-m1-cG
51 2q8r-a2-m1-cF 63 27 0.1290 0.1270 0.2963 3.8 2q8r-a2-m1-cF_2q8r-a2-m1-cG
52 7x98-a2-m1-cD 398 19 0.1452 0.0226 0.4737 8.0 7x98-a2-m1-cD_7x98-a2-m1-cC
53 7x98-a2-m1-cC 399 19 0.1452 0.0226 0.4737 8.0 7x98-a2-m1-cD_7x98-a2-m1-cC
54 7t6f-a1-m1-cB 1045 20 0.1613 0.0096 0.5000 9.5 7t6f-a1-m1-cA_7t6f-a1-m1-cB
55 7t6f-a1-m1-cA 1045 20 0.1613 0.0096 0.5000 9.5 7t6f-a1-m1-cA_7t6f-a1-m1-cB
56 8ewy-a1-m1-cB 1049 20 0.1613 0.0095 0.5000 9.5 8ewy-a1-m1-cA_8ewy-a1-m1-cB
57 8ewy-a1-m1-cA 1049 20 0.1613 0.0095 0.5000 9.5 8ewy-a1-m1-cA_8ewy-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600