Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=28)
CYCRIPACIAGERRYTCIYQGRLWAFCC

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1zmk-a2-m4-cB 28 28 1.0000 1.0000 1.0000 1.28e-14 1zmk-a2-m3-cB_1zmk-a2-m4-cB
2 1zmk-a2-m4-cA 28 28 1.0000 1.0000 1.0000 1.28e-14 1zmk-a2-m3-cA_1zmk-a2-m4-cA
3 1zmk-a2-m3-cB 28 28 1.0000 1.0000 1.0000 1.28e-14 1zmk-a2-m3-cB_1zmk-a2-m4-cB
4 1zmk-a2-m3-cA 28 28 1.0000 1.0000 1.0000 1.28e-14 1zmk-a2-m3-cA_1zmk-a2-m4-cA
5 1zmi-a4-m4-cC 28 28 1.0000 1.0000 1.0000 1.28e-14 1zmi-a4-m1-cB_1zmi-a4-m4-cC
6 1zmi-a4-m1-cB 28 28 1.0000 1.0000 1.0000 1.28e-14 1zmi-a4-m1-cB_1zmi-a4-m4-cC
7 1zmh-a4-m3-cC 28 28 1.0000 1.0000 1.0000 1.28e-14 1zmh-a4-m1-cC_1zmh-a4-m3-cC
8 1zmh-a4-m1-cC 28 28 1.0000 1.0000 1.0000 1.28e-14 1zmh-a4-m1-cC_1zmh-a4-m3-cC
9 3gny-a2-m1-cB 30 29 1.0000 0.9333 0.9655 7.62e-13 3gny-a2-m1-cA_3gny-a2-m1-cB
10 3gny-a2-m1-cA 30 29 1.0000 0.9333 0.9655 7.62e-13 3gny-a2-m1-cA_3gny-a2-m1-cB
11 3lvx-a3-m9-cB 30 29 0.9643 0.9000 0.9310 3.83e-12 3lvx-a3-m14-cA_3lvx-a3-m9-cB, 3lvx-a3-m9-cA_3lvx-a3-m9-cB
12 3lvx-a3-m9-cA 30 29 0.9643 0.9000 0.9310 3.83e-12 3lvx-a3-m20-cA_3lvx-a3-m9-cA, 3lvx-a3-m9-cA_3lvx-a3-m9-cB
13 3lvx-a3-m20-cA 30 29 0.9643 0.9000 0.9310 3.83e-12 3lvx-a3-m20-cA_3lvx-a3-m9-cA
14 3lvx-a3-m14-cA 30 29 0.9643 0.9000 0.9310 3.83e-12 3lvx-a3-m14-cA_3lvx-a3-m9-cB
15 3h6c-a1-m4-cA 30 29 0.9643 0.9000 0.9310 5.63e-12 3h6c-a1-m2-cB_3h6c-a1-m4-cA
16 3h6c-a1-m2-cB 30 29 0.9643 0.9000 0.9310 5.63e-12 3h6c-a1-m2-cB_3h6c-a1-m4-cA
17 4lbf-a2-m1-cH 30 29 0.9286 0.8667 0.8966 2.08e-11 4lbf-a2-m1-cE_4lbf-a2-m1-cH, 4lbf-a2-m1-cF_4lbf-a2-m1-cH
18 4lbf-a2-m1-cG 30 29 0.9286 0.8667 0.8966 2.08e-11 4lbf-a2-m1-cE_4lbf-a2-m1-cG
19 4lbf-a2-m1-cF 30 29 0.9286 0.8667 0.8966 2.08e-11 4lbf-a2-m1-cE_4lbf-a2-m1-cF, 4lbf-a2-m1-cF_4lbf-a2-m1-cH
20 4lbf-a1-m1-cC 30 29 0.9286 0.8667 0.8966 2.08e-11 4lbf-a1-m1-cB_4lbf-a1-m1-cC
21 4lbf-a1-m1-cB 30 29 0.9286 0.8667 0.8966 2.08e-11 4lbf-a1-m1-cA_4lbf-a1-m1-cB, 4lbf-a1-m1-cB_4lbf-a1-m1-cC
22 4lbf-a1-m1-cA 30 29 0.9286 0.8667 0.8966 2.08e-11 4lbf-a1-m1-cA_4lbf-a1-m1-cB
23 4lb1-a1-m1-cE 30 29 0.9286 0.8667 0.8966 7.20e-11 4lb1-a1-m1-cD_4lb1-a1-m1-cE
24 4lb1-a1-m1-cD 30 29 0.9286 0.8667 0.8966 7.20e-11 4lb1-a1-m1-cD_4lb1-a1-m1-cE
25 4lb7-a1-m1-cE 30 29 0.8571 0.8000 0.8276 1.76e-09 4lb7-a1-m1-cA_4lb7-a1-m1-cE
26 4lb7-a1-m1-cA 30 29 0.8571 0.8000 0.8276 1.76e-09 4lb7-a1-m1-cA_4lb7-a1-m1-cE
27 2pm5-a6-m4-cB 27 28 0.8571 0.8889 0.8571 1.14e-07 2pm5-a6-m1-cB_2pm5-a6-m4-cB
28 2pm5-a6-m1-cB 27 28 0.8571 0.8889 0.8571 1.14e-07 2pm5-a6-m1-cB_2pm5-a6-m4-cB
29 4lbf-a2-m1-cE 25 29 0.7857 0.8800 0.7586 9.05e-06 4lbf-a2-m1-cE_4lbf-a2-m1-cF, 4lbf-a2-m1-cE_4lbf-a2-m1-cG, 4lbf-a2-m1-cE_4lbf-a2-m1-cH
30 5cui-a3-m1-cF 32 29 0.4643 0.4062 0.4483 4.7 5cui-a3-m1-cD_5cui-a3-m1-cF, 5cui-a3-m1-cE_5cui-a3-m1-cF
31 5cui-a3-m1-cE 32 29 0.4643 0.4062 0.4483 4.7 5cui-a3-m1-cE_5cui-a3-m1-cF
32 5cui-a3-m1-cD 32 29 0.4643 0.4062 0.4483 4.7 5cui-a3-m1-cD_5cui-a3-m1-cF
33 5cui-a3-m1-cC 32 29 0.4643 0.4062 0.4483 4.7 5cui-a3-m1-cB_5cui-a3-m1-cC
34 5cui-a3-m1-cB 32 29 0.4643 0.4062 0.4483 4.7 5cui-a3-m1-cB_5cui-a3-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600