Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=28)
CYCRIPACIAGERRYTCIYQGRLWAFCC

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1zmk-a2-m4-cB 28 28 1.0000 1.0000 1.0000 1.28e-14 1zmk-a2-m3-cB_1zmk-a2-m4-cB
2 1zmk-a2-m4-cA 28 28 1.0000 1.0000 1.0000 1.28e-14 1zmk-a2-m3-cA_1zmk-a2-m4-cA
3 1zmk-a2-m3-cB 28 28 1.0000 1.0000 1.0000 1.28e-14 1zmk-a2-m3-cB_1zmk-a2-m4-cB
4 1zmk-a2-m3-cA 28 28 1.0000 1.0000 1.0000 1.28e-14 1zmk-a2-m3-cA_1zmk-a2-m4-cA
5 1zmi-a4-m4-cC 28 28 1.0000 1.0000 1.0000 1.28e-14 1zmi-a4-m1-cB_1zmi-a4-m4-cC
6 1zmi-a4-m1-cB 28 28 1.0000 1.0000 1.0000 1.28e-14 1zmi-a4-m1-cB_1zmi-a4-m4-cC
7 1zmh-a4-m3-cC 28 28 1.0000 1.0000 1.0000 1.28e-14 1zmh-a4-m1-cC_1zmh-a4-m3-cC
8 1zmh-a4-m1-cC 28 28 1.0000 1.0000 1.0000 1.28e-14 1zmh-a4-m1-cC_1zmh-a4-m3-cC
9 3gny-a2-m1-cB 30 29 1.0000 0.9333 0.9655 7.62e-13 3gny-a2-m1-cA_3gny-a2-m1-cB
10 3gny-a2-m1-cA 30 29 1.0000 0.9333 0.9655 7.62e-13 3gny-a2-m1-cA_3gny-a2-m1-cB
11 3lvx-a3-m9-cB 30 29 0.9643 0.9000 0.9310 3.83e-12 3lvx-a3-m14-cA_3lvx-a3-m9-cB, 3lvx-a3-m9-cA_3lvx-a3-m9-cB
12 3lvx-a3-m9-cA 30 29 0.9643 0.9000 0.9310 3.83e-12 3lvx-a3-m20-cA_3lvx-a3-m9-cA, 3lvx-a3-m9-cA_3lvx-a3-m9-cB
13 3lvx-a3-m20-cA 30 29 0.9643 0.9000 0.9310 3.83e-12 3lvx-a3-m20-cA_3lvx-a3-m9-cA
14 3lvx-a3-m14-cA 30 29 0.9643 0.9000 0.9310 3.83e-12 3lvx-a3-m14-cA_3lvx-a3-m9-cB
15 3h6c-a1-m4-cA 30 29 0.9643 0.9000 0.9310 5.63e-12 3h6c-a1-m2-cB_3h6c-a1-m4-cA
16 3h6c-a1-m2-cB 30 29 0.9643 0.9000 0.9310 5.63e-12 3h6c-a1-m2-cB_3h6c-a1-m4-cA
17 4lbf-a2-m1-cH 30 29 0.9286 0.8667 0.8966 2.08e-11 4lbf-a2-m1-cE_4lbf-a2-m1-cH, 4lbf-a2-m1-cF_4lbf-a2-m1-cH
18 4lbf-a2-m1-cG 30 29 0.9286 0.8667 0.8966 2.08e-11 4lbf-a2-m1-cE_4lbf-a2-m1-cG
19 4lbf-a2-m1-cF 30 29 0.9286 0.8667 0.8966 2.08e-11 4lbf-a2-m1-cE_4lbf-a2-m1-cF, 4lbf-a2-m1-cF_4lbf-a2-m1-cH
20 4lbf-a1-m1-cC 30 29 0.9286 0.8667 0.8966 2.08e-11 4lbf-a1-m1-cB_4lbf-a1-m1-cC
21 4lbf-a1-m1-cB 30 29 0.9286 0.8667 0.8966 2.08e-11 4lbf-a1-m1-cA_4lbf-a1-m1-cB, 4lbf-a1-m1-cB_4lbf-a1-m1-cC
22 4lbf-a1-m1-cA 30 29 0.9286 0.8667 0.8966 2.08e-11 4lbf-a1-m1-cA_4lbf-a1-m1-cB
23 4lb1-a1-m1-cE 30 29 0.9286 0.8667 0.8966 7.20e-11 4lb1-a1-m1-cD_4lb1-a1-m1-cE
24 4lb1-a1-m1-cD 30 29 0.9286 0.8667 0.8966 7.20e-11 4lb1-a1-m1-cD_4lb1-a1-m1-cE
25 4lb7-a1-m1-cE 30 29 0.8571 0.8000 0.8276 1.76e-09 4lb7-a1-m1-cA_4lb7-a1-m1-cE
26 4lb7-a1-m1-cA 30 29 0.8571 0.8000 0.8276 1.76e-09 4lb7-a1-m1-cA_4lb7-a1-m1-cE
27 2pm5-a6-m4-cB 27 28 0.8571 0.8889 0.8571 1.14e-07 2pm5-a6-m1-cB_2pm5-a6-m4-cB
28 2pm5-a6-m1-cB 27 28 0.8571 0.8889 0.8571 1.14e-07 2pm5-a6-m1-cB_2pm5-a6-m4-cB
29 4lbf-a2-m1-cE 25 29 0.7857 0.8800 0.7586 9.05e-06 4lbf-a2-m1-cE_4lbf-a2-m1-cF, 4lbf-a2-m1-cE_4lbf-a2-m1-cG, 4lbf-a2-m1-cE_4lbf-a2-m1-cH
30 5cui-a3-m1-cF 32 29 0.4643 0.4062 0.4483 4.7 5cui-a3-m1-cD_5cui-a3-m1-cF, 5cui-a3-m1-cE_5cui-a3-m1-cF
31 5cui-a3-m1-cE 32 29 0.4643 0.4062 0.4483 4.7 5cui-a3-m1-cE_5cui-a3-m1-cF
32 5cui-a3-m1-cD 32 29 0.4643 0.4062 0.4483 4.7 5cui-a3-m1-cD_5cui-a3-m1-cF
33 5cui-a3-m1-cC 32 29 0.4643 0.4062 0.4483 4.7 5cui-a3-m1-cB_5cui-a3-m1-cC
34 5cui-a3-m1-cB 32 29 0.4643 0.4062 0.4483 4.7 5cui-a3-m1-cB_5cui-a3-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600