Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
DADEVTFVNRFTVHGAPAEFESVFARTAAFFARQPGFVRHTLLRERDKDNSYVNIAVWTD
HDAFRRALAQPGFLPHATALRALSTSEHGLFTARQTL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3kg0-a3-m1-cC 97 97 1.0000 1.0000 1.0000 4.76e-67 3kg0-a3-m1-cC_3kg0-a3-m2-cA
2 3kg0-a3-m2-cA 97 96 0.9897 0.9897 1.0000 4.63e-66 3kg0-a3-m1-cC_3kg0-a3-m2-cA
3 7bio-a1-m1-cA 106 83 0.3918 0.3585 0.4578 1.00e-19 7bio-a1-m1-cA_7bio-a1-m1-cB
4 7bio-a1-m1-cB 111 83 0.3918 0.3423 0.4578 2.61e-19 7bio-a1-m1-cA_7bio-a1-m1-cB
5 1iuj-a2-m2-cA 102 67 0.2474 0.2353 0.3582 4.15e-08 1iuj-a2-m1-cA_1iuj-a2-m2-cA, 1iuj-a2-m2-cA_1iuj-a2-m2-cB
6 1iuj-a2-m1-cA 102 67 0.2474 0.2353 0.3582 4.15e-08 1iuj-a2-m1-cA_1iuj-a2-m2-cA, 1iuj-a2-m1-cA_1iuj-a2-m2-cB
7 1iuj-a2-m2-cB 103 67 0.2474 0.2330 0.3582 4.51e-08 1iuj-a2-m1-cA_1iuj-a2-m2-cB, 1iuj-a2-m2-cA_1iuj-a2-m2-cB
8 2ril-a1-m2-cA 91 65 0.1959 0.2088 0.2923 0.006 2ril-a1-m1-cA_2ril-a1-m2-cA
9 2ril-a1-m1-cA 91 65 0.1959 0.2088 0.2923 0.006 2ril-a1-m1-cA_2ril-a1-m2-cA
10 6ple-a1-m1-cB 96 63 0.2062 0.2083 0.3175 0.007 6ple-a1-m1-cA_6ple-a1-m1-cB
11 6ple-a1-m1-cA 96 63 0.2062 0.2083 0.3175 0.007 6ple-a1-m1-cA_6ple-a1-m1-cB
12 6ds7-a1-m1-cB 99 63 0.2062 0.2020 0.3175 0.008 6ds7-a1-m1-cA_6ds7-a1-m1-cB
13 6ds7-a1-m1-cA 99 63 0.2062 0.2020 0.3175 0.008 6ds7-a1-m1-cA_6ds7-a1-m1-cB
14 4nl5-a2-m2-cB 100 63 0.2062 0.2000 0.3175 0.022 4nl5-a2-m2-cB_4nl5-a2-m1-cA
15 4nl5-a2-m1-cA 101 63 0.2062 0.1980 0.3175 0.024 4nl5-a2-m2-cB_4nl5-a2-m1-cA
16 7umt-a1-m1-c3 270 88 0.2268 0.0815 0.2500 0.029 7umt-a1-m1-c2_7umt-a1-m1-c3
17 7umt-a1-m1-c2 270 88 0.2268 0.0815 0.2500 0.029 7umt-a1-m1-c2_7umt-a1-m1-c3
18 5uq4-a1-m1-cB 90 66 0.2165 0.2333 0.3182 0.065 5uq4-a1-m1-cA_5uq4-a1-m1-cB
19 7ums-a1-m1-c3 486 88 0.2268 0.0453 0.2500 0.085 7ums-a1-m1-c3_7ums-a1-m1-c1, 7ums-a1-m1-c3_7ums-a1-m1-c2
20 7ums-a1-m1-c2 499 88 0.2268 0.0441 0.2500 0.085 7ums-a1-m1-c1_7ums-a1-m1-c2, 7ums-a1-m1-c3_7ums-a1-m1-c2
21 7ums-a1-m1-c1 499 88 0.2268 0.0441 0.2500 0.085 7ums-a1-m1-c1_7ums-a1-m1-c2, 7ums-a1-m1-c3_7ums-a1-m1-c1
22 5uq4-a1-m1-cA 86 51 0.1753 0.1977 0.3333 0.11 5uq4-a1-m1-cA_5uq4-a1-m1-cB
23 3bxv-a1-m9-cA 308 41 0.1443 0.0455 0.3415 0.13 3bxv-a1-m15-cA_3bxv-a1-m9-cA, 3bxv-a1-m24-cA_3bxv-a1-m9-cA, 3bxv-a1-m7-cA_3bxv-a1-m9-cA
24 3bxv-a1-m7-cA 308 41 0.1443 0.0455 0.3415 0.13 3bxv-a1-m7-cA_3bxv-a1-m9-cA
25 3bxv-a1-m24-cA 308 41 0.1443 0.0455 0.3415 0.13 3bxv-a1-m24-cA_3bxv-a1-m9-cA
26 3bxv-a1-m15-cA 308 41 0.1443 0.0455 0.3415 0.13 3bxv-a1-m15-cA_3bxv-a1-m9-cA
27 8co6-a1-m5-cA 726 21 0.1134 0.0152 0.5238 2.9 8co6-a1-m5-cA_8co6-a1-m5-cB
28 8co6-a1-m5-cB 744 21 0.1134 0.0148 0.5238 2.9 8co6-a1-m5-cA_8co6-a1-m5-cB
29 2npn-a3-m3-cA 233 64 0.2062 0.0858 0.3125 3.1 2npn-a3-m1-cA_2npn-a3-m3-cA
30 2npn-a3-m1-cA 233 64 0.2062 0.0858 0.3125 3.1 2npn-a3-m1-cA_2npn-a3-m3-cA
31 2npn-a2-m2-cA 233 64 0.2062 0.0858 0.3125 3.1 2npn-a2-m1-cA_2npn-a2-m2-cA
32 2npn-a2-m1-cA 233 64 0.2062 0.0858 0.3125 3.1 2npn-a2-m1-cA_2npn-a2-m2-cA
33 4ijz-a1-m1-cA 274 61 0.2165 0.0766 0.3443 8.4 4ijz-a1-m1-cA_4ijz-a1-m1-cB
34 4ijz-a1-m1-cB 275 61 0.2165 0.0764 0.3443 8.7 4ijz-a1-m1-cA_4ijz-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600