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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
DAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIGAAPIEDLVDRASSSLEKSRDIYVYGAG
DEQTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3k9r-a4-m1-cB 98 98 1.0000 1.0000 1.0000 2.45e-68 3k9r-a4-m2-cD_3k9r-a4-m1-cB
2 3k9r-a1-m1-cB 98 98 1.0000 1.0000 1.0000 2.45e-68 3k9r-a1-m1-cB_3k9r-a1-m2-cC
3 3k9r-a5-m1-cC 103 98 1.0000 0.9515 1.0000 2.51e-68 3k9r-a5-m1-cD_3k9r-a5-m1-cC
4 3k9r-a1-m2-cC 103 98 1.0000 0.9515 1.0000 2.51e-68 3k9r-a1-m1-cB_3k9r-a1-m2-cC
5 3ilm-a2-m1-cC 122 97 0.9898 0.7951 1.0000 6.72e-68 3ilm-a2-m1-cD_3ilm-a2-m1-cC
6 3ilm-a2-m1-cD 121 97 0.9898 0.8017 1.0000 7.02e-68 3ilm-a2-m1-cD_3ilm-a2-m1-cC
7 3k9r-a1-m1-cA 96 98 0.9694 0.9896 0.9694 1.28e-63 3k9r-a1-m2-cD_3k9r-a1-m1-cA
8 3k9r-a5-m1-cD 95 98 0.9694 1.0000 0.9694 1.68e-63 3k9r-a5-m1-cD_3k9r-a5-m1-cC
9 3k9r-a4-m2-cD 95 98 0.9694 1.0000 0.9694 1.68e-63 3k9r-a4-m2-cD_3k9r-a4-m1-cB
10 3k9r-a1-m2-cD 95 98 0.9694 1.0000 0.9694 1.68e-63 3k9r-a1-m2-cD_3k9r-a1-m1-cA
11 3hix-a5-m3-cC 84 84 0.8571 1.0000 1.0000 5.27e-57 3hix-a5-m1-cC_3hix-a5-m3-cC
12 3hix-a5-m1-cC 84 84 0.8571 1.0000 1.0000 5.27e-57 3hix-a5-m1-cC_3hix-a5-m3-cC
13 6pfz-a2-m1-cA 541 54 0.1939 0.0351 0.3519 0.008 6pfz-a2-m1-cA_6pfz-a2-m1-cB
14 1qxn-a1-m1-cB 137 98 0.2551 0.1825 0.2551 0.008 1qxn-a1-m1-cA_1qxn-a1-m1-cB
15 1qxn-a1-m1-cA 137 98 0.2551 0.1825 0.2551 0.008 1qxn-a1-m1-cA_1qxn-a1-m1-cB
16 2hhg-a2-m2-cA 128 91 0.2551 0.1953 0.2747 0.035 2hhg-a2-m1-cA_2hhg-a2-m2-cA
17 2hhg-a2-m1-cA 128 91 0.2551 0.1953 0.2747 0.035 2hhg-a2-m1-cA_2hhg-a2-m2-cA
18 6mxv-a1-m1-cA 245 85 0.2347 0.0939 0.2706 0.055 6mxv-a1-m1-cA_6mxv-a1-m1-cB
19 6mxv-a1-m1-cB 246 85 0.2347 0.0935 0.2706 0.058 6mxv-a1-m1-cA_6mxv-a1-m1-cB
20 4w6q-a1-m1-cA 331 86 0.2653 0.0785 0.3023 0.42 4w6q-a1-m1-cA_4w6q-a1-m1-cD
21 4w6q-a1-m1-cD 332 86 0.2653 0.0783 0.3023 0.42 4w6q-a1-m1-cA_4w6q-a1-m1-cD, 4w6q-a1-m1-cB_4w6q-a1-m1-cD, 4w6q-a1-m1-cC_4w6q-a1-m1-cD
22 4w6q-a1-m1-cC 332 86 0.2653 0.0783 0.3023 0.42 4w6q-a1-m1-cC_4w6q-a1-m1-cD
23 4w6q-a1-m1-cB 332 86 0.2653 0.0783 0.3023 0.42 4w6q-a1-m1-cB_4w6q-a1-m1-cD
24 7uwk-a1-m1-cI 249 55 0.1735 0.0683 0.3091 1.9 7uwk-a1-m1-cI_7uwk-a1-m1-cL
25 7uwk-a1-m1-cL 252 55 0.1735 0.0675 0.3091 2.1 7uwk-a1-m1-cI_7uwk-a1-m1-cL
26 3zye-a1-m2-cA 181 96 0.2551 0.1381 0.2604 4.3 3zye-a1-m1-cA_3zye-a1-m2-cA
27 3zye-a1-m1-cA 181 96 0.2551 0.1381 0.2604 4.3 3zye-a1-m1-cA_3zye-a1-m2-cA
28 3zzd-a1-m2-cA 180 96 0.2551 0.1389 0.2604 4.8 3zzd-a1-m1-cA_3zzd-a1-m2-cA
29 3zzd-a1-m1-cA 180 96 0.2551 0.1389 0.2604 4.8 3zzd-a1-m1-cA_3zzd-a1-m2-cA
30 1zrn-a1-m2-cA 220 50 0.1429 0.0636 0.2800 5.1 1zrn-a1-m1-cA_1zrn-a1-m2-cA
31 1zrn-a1-m1-cA 220 50 0.1429 0.0636 0.2800 5.1 1zrn-a1-m1-cA_1zrn-a1-m2-cA
32 6ve6-a3-m1-cC 264 79 0.2041 0.0758 0.2532 7.2 6ve6-a3-m1-cC_6ve6-a3-m1-cD
33 4isb-a1-m1-cA 499 68 0.2143 0.0421 0.3088 7.2 4isb-a1-m1-cB_4isb-a1-m1-cA
34 6ve6-a3-m1-cD 266 79 0.2041 0.0752 0.2532 7.8 6ve6-a3-m1-cC_6ve6-a3-m1-cD
35 3kor-a2-m1-cB 97 16 0.0918 0.0928 0.5625 8.6 3kor-a2-m1-cC_3kor-a2-m1-cB
36 3kor-a2-m1-cC 96 16 0.0918 0.0938 0.5625 9.2 3kor-a2-m1-cC_3kor-a2-m1-cB
37 3m0z-a1-m1-cC 241 58 0.1735 0.0705 0.2931 9.5 3m0z-a1-m1-cC_3m0z-a1-m1-cD
38 3m0z-a1-m1-cA 241 58 0.1735 0.0705 0.2931 9.5 3m0z-a1-m1-cA_3m0z-a1-m1-cD
39 3m0z-a1-m1-cD 242 58 0.1735 0.0702 0.2931 9.9 3m0z-a1-m1-cA_3m0z-a1-m1-cD, 3m0z-a1-m1-cC_3m0z-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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