Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
DAQIIIPNGNYDVTGAGFYSPLNLEIPVGTTVTWTNDDSVPHNIQSIDVNGKVIQLFNSP
PLNTGDRFEHVFEEEGVYKYYCSFHPWRVGLVTVS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5fc9-a1-m1-cD 95 95 1.0000 1.0000 1.0000 2.30e-67 5fc9-a1-m1-cA_5fc9-a1-m1-cD, 5fc9-a1-m1-cB_5fc9-a1-m1-cD, 5fc9-a1-m1-cC_5fc9-a1-m1-cD
2 5fc9-a1-m1-cC 95 95 1.0000 1.0000 1.0000 2.30e-67 5fc9-a1-m1-cC_5fc9-a1-m1-cD
3 5fc9-a1-m1-cB 95 95 1.0000 1.0000 1.0000 2.30e-67 5fc9-a1-m1-cB_5fc9-a1-m1-cD
4 5fc9-a1-m1-cA 95 95 1.0000 1.0000 1.0000 2.30e-67 5fc9-a1-m1-cA_5fc9-a1-m1-cD
5 6hbe-a1-m1-cB 425 92 0.3684 0.0824 0.3804 2.45e-10 6hbe-a1-m1-cB_6hbe-a1-m1-cC
6 6hbe-a1-m1-cC 427 92 0.3684 0.0820 0.3804 2.55e-10 6hbe-a1-m1-cB_6hbe-a1-m1-cC
7 3ie9-a3-m3-cA 105 84 0.2842 0.2571 0.3214 3.90e-09 3ie9-a3-m2-cA_3ie9-a3-m3-cA
8 3ie9-a3-m2-cA 105 84 0.2842 0.2571 0.3214 3.90e-09 3ie9-a3-m2-cA_3ie9-a3-m3-cA
9 3ie9-a2-m6-cA 105 84 0.2842 0.2571 0.3214 3.90e-09 3ie9-a2-m3-cA_3ie9-a2-m6-cA
10 3ie9-a2-m3-cA 105 84 0.2842 0.2571 0.3214 3.90e-09 3ie9-a2-m3-cA_3ie9-a2-m6-cA
11 1pcs-a1-m2-cA 98 77 0.2737 0.2653 0.3377 1.23e-05 1pcs-a1-m1-cA_1pcs-a1-m2-cA
12 1pcs-a1-m1-cA 98 77 0.2737 0.2653 0.3377 1.23e-05 1pcs-a1-m1-cA_1pcs-a1-m2-cA
13 2q5b-a5-m3-cB 105 92 0.3158 0.2857 0.3261 7.68e-04 2q5b-a5-m2-cA_2q5b-a5-m3-cB
14 2q5b-a5-m2-cA 105 92 0.3158 0.2857 0.3261 7.68e-04 2q5b-a5-m1-cC_2q5b-a5-m2-cA, 2q5b-a5-m2-cA_2q5b-a5-m3-cB
15 2q5b-a5-m1-cC 105 92 0.3158 0.2857 0.3261 7.68e-04 2q5b-a5-m1-cC_2q5b-a5-m2-cA
16 1baw-a2-m1-cB 105 92 0.3158 0.2857 0.3261 7.68e-04 1baw-a2-m1-cA_1baw-a2-m1-cB
17 1baw-a2-m1-cA 105 92 0.3158 0.2857 0.3261 7.68e-04 1baw-a2-m1-cA_1baw-a2-m1-cB
18 1baw-a1-m2-cB 105 92 0.3158 0.2857 0.3261 7.68e-04 1baw-a1-m1-cA_1baw-a1-m2-cB
19 1baw-a1-m1-cA 105 92 0.3158 0.2857 0.3261 7.68e-04 1baw-a1-m1-cA_1baw-a1-m2-cB
20 2w8c-a3-m8-cB 106 92 0.3158 0.2830 0.3261 7.96e-04 2w8c-a3-m1-cA_2w8c-a3-m8-cB
21 2w8c-a3-m1-cA 106 92 0.3158 0.2830 0.3261 7.96e-04 2w8c-a3-m1-cA_2w8c-a3-m8-cB
22 1dth-a1-m1-cB 202 30 0.1263 0.0594 0.4000 1.2 1dth-a1-m1-cA_1dth-a1-m1-cB
23 1dth-a1-m1-cA 202 30 0.1263 0.0594 0.4000 1.2 1dth-a1-m1-cA_1dth-a1-m1-cB
24 2oas-a2-m2-cB 420 46 0.1579 0.0357 0.3261 2.6 2oas-a2-m1-cA_2oas-a2-m2-cB, 2oas-a2-m2-cA_2oas-a2-m2-cB
25 2oas-a2-m2-cA 420 46 0.1579 0.0357 0.3261 2.6 2oas-a2-m2-cA_2oas-a2-m2-cB
26 2oas-a2-m1-cA 420 46 0.1579 0.0357 0.3261 2.6 2oas-a2-m1-cA_2oas-a2-m2-cB
27 7sj2-a1-m1-cA 428 58 0.2000 0.0444 0.3276 2.8 7sj2-a1-m1-cA_7sj2-a1-m1-cB
28 4guz-a7-m3-cC 284 40 0.1368 0.0458 0.3250 8.6 4guz-a7-m1-cC_4guz-a7-m3-cC
29 4guz-a7-m1-cC 284 40 0.1368 0.0458 0.3250 8.6 4guz-a7-m1-cC_4guz-a7-m3-cC
30 1wzx-a1-m1-cD 173 58 0.1789 0.0983 0.2931 9.4 1wzx-a1-m1-cD_1wzx-a1-m1-cB
31 1wzx-a1-m1-cC 173 58 0.1789 0.0983 0.2931 9.4 1wzx-a1-m1-cC_1wzx-a1-m1-cA
32 1wmx-a1-m1-cA 173 58 0.1789 0.0983 0.2931 9.4 1wmx-a1-m1-cA_1wmx-a1-m1-cB
33 1wzx-a1-m1-cA 175 58 0.1789 0.0971 0.2931 9.6 1wzx-a1-m1-cB_1wzx-a1-m1-cA, 1wzx-a1-m1-cC_1wzx-a1-m1-cA
34 1wzx-a1-m1-cB 174 58 0.1789 0.0977 0.2931 9.9 1wzx-a1-m1-cB_1wzx-a1-m1-cA, 1wzx-a1-m1-cD_1wzx-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600