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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=52)
DARQISLQQQLIHVMEHICKLIDTIPDDKLKLLDCGNELLQQRNIRRKLLTE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5lup-a4-m1-cG 52 52 1.0000 1.0000 1.0000 2.26e-31 5lup-a4-m1-cG_5lup-a4-m1-cH
2 5lup-a4-m1-cH 52 52 0.9808 0.9808 0.9808 5.38e-31 5lup-a4-m1-cG_5lup-a4-m1-cH
3 5lus-a5-m1-cJ 50 45 0.4808 0.5000 0.5556 1.92e-11 5lus-a5-m1-cI_5lus-a5-m1-cJ
4 5lus-a5-m1-cI 50 45 0.4808 0.5000 0.5556 1.92e-11 5lus-a5-m1-cI_5lus-a5-m1-cJ
5 5lut-a3-m1-cD 53 50 0.5000 0.4906 0.5200 1.26e-09 5lut-a3-m1-cC_5lut-a3-m1-cD
6 5lut-a3-m1-cC 51 48 0.5000 0.5098 0.5417 1.39e-09 5lut-a3-m1-cC_5lut-a3-m1-cD
7 6ckt-a1-m3-cA 273 28 0.2692 0.0513 0.5000 0.027 6ckt-a1-m2-cA_6ckt-a1-m3-cA
8 6ckt-a1-m2-cA 273 28 0.2692 0.0513 0.5000 0.027 6ckt-a1-m2-cA_6ckt-a1-m3-cA
9 1poi-a1-m2-cC 317 21 0.1538 0.0252 0.3810 3.8 1poi-a1-m1-cC_1poi-a1-m2-cC, 1poi-a1-m2-cA_1poi-a1-m2-cC
10 1poi-a1-m2-cA 317 21 0.1538 0.0252 0.3810 3.8 1poi-a1-m2-cA_1poi-a1-m2-cC
11 1poi-a1-m1-cC 317 21 0.1538 0.0252 0.3810 3.8 1poi-a1-m1-cC_1poi-a1-m2-cC
12 5n2a-a1-m2-cB 443 36 0.2308 0.0271 0.3333 7.6 5n2a-a1-m1-cB_5n2a-a1-m2-cB
13 5n2a-a1-m1-cB 443 36 0.2308 0.0271 0.3333 7.6 5n2a-a1-m1-cB_5n2a-a1-m2-cB
14 3hmz-a1-m2-cA 187 18 0.1731 0.0481 0.5000 9.5 3hmz-a1-m1-cA_3hmz-a1-m2-cA
15 3hmz-a1-m1-cA 187 18 0.1731 0.0481 0.5000 9.5 3hmz-a1-m1-cA_3hmz-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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