Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
DCCLKYSQRKIPAKVVRSYRKQEPSLGCSIPAILFLPRKRSQAELCADPKELWVQQLMQH
LDKTPSPQKP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5eki-a7-m1-cA 72 70 1.0000 0.9722 1.0000 1.30e-46 5eki-a7-m1-cF_5eki-a7-m1-cA
2 5eki-a7-m1-cF 70 70 1.0000 1.0000 1.0000 1.60e-46 5eki-a7-m1-cF_5eki-a7-m1-cA
3 2hci-a1-m1-cA 68 63 0.3286 0.3382 0.3651 6.96e-11 2hci-a1-m1-cB_2hci-a1-m1-cA
4 1ncv-a1-m1-cB 76 62 0.3571 0.3289 0.4032 7.21e-11 1ncv-a1-m1-cA_1ncv-a1-m1-cB
5 1ncv-a1-m1-cA 76 62 0.3571 0.3289 0.4032 7.21e-11 1ncv-a1-m1-cA_1ncv-a1-m1-cB
6 2hci-a1-m1-cB 65 63 0.3286 0.3538 0.3651 7.90e-11 2hci-a1-m1-cB_2hci-a1-m1-cA
7 5ltl-a1-m1-cB 68 58 0.3143 0.3235 0.3793 2.73e-10 5ltl-a1-m1-cA_5ltl-a1-m1-cB
8 5ltl-a1-m1-cA 67 58 0.3143 0.3284 0.3793 2.85e-10 5ltl-a1-m1-cA_5ltl-a1-m1-cB
9 1esr-a1-m2-cA 75 69 0.3714 0.3467 0.3768 3.77e-09 1esr-a1-m1-cA_1esr-a1-m2-cA
10 1esr-a1-m1-cA 75 69 0.3714 0.3467 0.3768 3.77e-09 1esr-a1-m1-cA_1esr-a1-m2-cA
11 7s5a-a1-m1-cB 76 69 0.3714 0.3421 0.3768 4.03e-09 7s5a-a1-m1-cA_7s5a-a1-m1-cB
12 7s5a-a1-m1-cA 73 62 0.3429 0.3288 0.3871 7.82e-09 7s5a-a1-m1-cA_7s5a-a1-m1-cB
13 2ra4-a4-m4-cB 65 61 0.3429 0.3692 0.3934 2.85e-08 2ra4-a4-m2-cB_2ra4-a4-m4-cB
14 2ra4-a4-m2-cB 65 61 0.3429 0.3692 0.3934 2.85e-08 2ra4-a4-m2-cB_2ra4-a4-m4-cB
15 2ra4-a2-m4-cB 65 61 0.3429 0.3692 0.3934 2.85e-08 2ra4-a2-m4-cA_2ra4-a2-m4-cB
16 2ra4-a2-m4-cA 65 61 0.3429 0.3692 0.3934 2.85e-08 2ra4-a2-m4-cA_2ra4-a2-m4-cB
17 1hrj-a1-m1-cB 68 61 0.3000 0.3088 0.3443 5.18e-07 1hrj-a1-m1-cA_1hrj-a1-m1-cB
18 1hrj-a1-m1-cA 68 61 0.3000 0.3088 0.3443 5.18e-07 1hrj-a1-m1-cA_1hrj-a1-m1-cB
19 5l2u-a2-m2-cI 65 61 0.3000 0.3231 0.3443 5.35e-07 5l2u-a2-m2-cG_5l2u-a2-m2-cI
20 5dnf-a1-m1-cG 65 61 0.3000 0.3231 0.3443 5.35e-07 5dnf-a1-m1-cE_5dnf-a1-m1-cG
21 5dnf-a1-m1-cE 65 61 0.3000 0.3231 0.3443 5.35e-07 5dnf-a1-m1-cE_5dnf-a1-m1-cG
22 5dnf-a1-m1-cD 65 61 0.3000 0.3231 0.3443 5.35e-07 5dnf-a1-m1-cA_5dnf-a1-m1-cD
23 5dnf-a1-m1-cA 65 61 0.3000 0.3231 0.3443 5.35e-07 5dnf-a1-m1-cA_5dnf-a1-m1-cD
24 4mhe-a2-m1-cB 69 60 0.3000 0.3043 0.3500 5.47e-07 4mhe-a2-m1-cC_4mhe-a2-m1-cB
25 2l9h-a1-m1-cC 67 61 0.3000 0.3134 0.3443 5.47e-07 2l9h-a1-m1-cA_2l9h-a1-m1-cC
26 2l9h-a1-m1-cA 67 61 0.3000 0.3134 0.3443 5.47e-07 2l9h-a1-m1-cA_2l9h-a1-m1-cC
27 5l2u-a2-m2-cH 64 61 0.3000 0.3281 0.3443 6.03e-07 5l2u-a2-m2-cG_5l2u-a2-m2-cH
28 5l2u-a2-m2-cG 64 61 0.3000 0.3281 0.3443 6.03e-07 5l2u-a2-m2-cG_5l2u-a2-m2-cH, 5l2u-a2-m2-cG_5l2u-a2-m2-cI
29 2vxw-a1-m1-cD 62 61 0.3000 0.3387 0.3443 6.51e-07 2vxw-a1-m1-cD_2vxw-a1-m1-cA, 2vxw-a1-m1-cD_2vxw-a1-m1-cB
30 2vxw-a1-m1-cB 69 63 0.3000 0.3043 0.3333 7.74e-07 2vxw-a1-m1-cD_2vxw-a1-m1-cB
31 2vxw-a1-m1-cA 69 63 0.3000 0.3043 0.3333 7.74e-07 2vxw-a1-m1-cD_2vxw-a1-m1-cA
32 4mhe-a2-m1-cC 61 60 0.3000 0.3443 0.3500 8.10e-07 4mhe-a2-m1-cC_4mhe-a2-m1-cB
33 6aez-a1-m3-cA 64 61 0.3000 0.3281 0.3443 1.09e-06 6aez-a1-m2-cA_6aez-a1-m3-cA
34 6aez-a1-m2-cA 64 61 0.3000 0.3281 0.3443 1.09e-06 6aez-a1-m2-cA_6aez-a1-m3-cA
35 2fj2-a2-m1-cC 68 63 0.3429 0.3529 0.3810 2.18e-06 2fj2-a2-m1-cD_2fj2-a2-m1-cC
36 2fj2-a2-m1-cD 67 63 0.3429 0.3582 0.3810 2.18e-06 2fj2-a2-m1-cD_2fj2-a2-m1-cC
37 1f2l-a1-m1-cD 70 58 0.3143 0.3143 0.3793 3.43e-06 1f2l-a1-m1-cA_1f2l-a1-m1-cD, 1f2l-a1-m1-cC_1f2l-a1-m1-cD
38 2q8r-a2-m1-cG 63 61 0.2571 0.2857 0.2951 3.45e-06 2q8r-a2-m1-cF_2q8r-a2-m1-cG
39 2q8r-a2-m1-cF 63 61 0.2571 0.2857 0.2951 3.45e-06 2q8r-a2-m1-cF_2q8r-a2-m1-cG
40 1f2l-a1-m1-cC 64 54 0.3143 0.3438 0.4074 3.60e-06 1f2l-a1-m1-cC_1f2l-a1-m1-cD
41 1f2l-a1-m1-cA 64 54 0.3143 0.3438 0.4074 3.60e-06 1f2l-a1-m1-cA_1f2l-a1-m1-cD
42 5yam-a1-m1-cB 69 63 0.2857 0.2899 0.3175 1.02e-05 5yam-a1-m1-cA_5yam-a1-m1-cB
43 5yam-a1-m1-cA 69 63 0.2857 0.2899 0.3175 1.02e-05 5yam-a1-m1-cA_5yam-a1-m1-cB
44 6log-a1-m2-cA 63 61 0.2857 0.3175 0.3279 3.00e-05 6log-a1-m1-cA_6log-a1-m2-cA
45 6log-a1-m1-cA 63 61 0.2857 0.3175 0.3279 3.00e-05 6log-a1-m1-cA_6log-a1-m2-cA
46 2n54-a1-m1-cB 66 61 0.2000 0.2121 0.2295 1.20e-04 2n54-a1-m1-cA_2n54-a1-m1-cB
47 2n54-a1-m1-cA 66 61 0.2000 0.2121 0.2295 1.20e-04 2n54-a1-m1-cA_2n54-a1-m1-cB
48 2jp1-a1-m1-cB 60 56 0.2000 0.2333 0.2500 0.002 2jp1-a1-m1-cA_2jp1-a1-m1-cB
49 2jp1-a1-m1-cA 60 56 0.2000 0.2333 0.2500 0.002 2jp1-a1-m1-cA_2jp1-a1-m1-cB
50 4oij-a1-m1-cB 71 68 0.2857 0.2817 0.2941 0.003 4oij-a1-m1-cA_4oij-a1-m1-cB
51 4oij-a1-m1-cA 71 68 0.2857 0.2817 0.2941 0.003 4oij-a1-m1-cA_4oij-a1-m1-cB
52 1nr4-a5-m3-cE 69 61 0.2429 0.2464 0.2787 0.022 1nr4-a5-m1-cA_1nr4-a5-m3-cE, 1nr4-a5-m3-cF_1nr4-a5-m3-cE, 1nr4-a5-m4-cG_1nr4-a5-m3-cE
53 1nr4-a5-m1-cA 67 61 0.2429 0.2537 0.2787 0.024 1nr4-a5-m1-cA_1nr4-a5-m3-cE
54 1nr4-a5-m4-cG 66 61 0.2429 0.2576 0.2787 0.025 1nr4-a5-m4-cG_1nr4-a5-m3-cE
55 1nr4-a5-m3-cF 66 61 0.2429 0.2576 0.2787 0.027 1nr4-a5-m3-cF_1nr4-a5-m3-cE
56 1qe6-a3-m2-cA 68 61 0.2571 0.2647 0.2951 0.050 1qe6-a3-m2-cA_1qe6-a3-m2-cB
57 1qe6-a3-m2-cB 71 61 0.2571 0.2535 0.2951 0.060 1qe6-a3-m2-cA_1qe6-a3-m2-cB, 1qe6-a3-m2-cB_1qe6-a3-m1-cD
58 1qe6-a3-m1-cD 72 61 0.2571 0.2500 0.2951 0.063 1qe6-a3-m2-cB_1qe6-a3-m1-cD
59 3hp3-a3-m1-cD 64 52 0.2000 0.2188 0.2692 7.9 3hp3-a3-m1-cD_3hp3-a3-m1-cF
60 4uai-a1-m1-cB 67 52 0.2000 0.2090 0.2692 8.5 4uai-a1-m1-cB_4uai-a1-m1-cA
61 3hp3-a3-m1-cF 65 52 0.2000 0.2154 0.2692 8.6 3hp3-a3-m1-cD_3hp3-a3-m1-cF
62 4uai-a1-m1-cA 68 52 0.2000 0.2059 0.2692 9.1 4uai-a1-m1-cB_4uai-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600