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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
DCMFGNGKGYRGKRVTTVTGTPCQDWAAQEPHRHSIFTPETNPRAGLEKNYCRNPDGDVG
GPWCYTTNPRKLYDYCDVPQCAAP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5hpg-a1-m1-cB 84 84 1.0000 1.0000 1.0000 3.63e-60 5hpg-a1-m1-cA_5hpg-a1-m1-cB
2 5hpg-a1-m1-cA 84 84 1.0000 1.0000 1.0000 3.63e-60 5hpg-a1-m1-cA_5hpg-a1-m1-cB
3 5cp9-a1-m1-cA 173 82 0.4524 0.2197 0.4634 6.84e-25 5cp9-a1-m1-cA_5cp9-a1-m1-cB
4 5cp9-a1-m1-cB 173 82 0.4524 0.2197 0.4634 6.91e-25 5cp9-a1-m1-cA_5cp9-a1-m1-cB
5 2qj4-a1-m1-cB 172 82 0.4524 0.2209 0.4634 1.34e-23 2qj4-a1-m1-cA_2qj4-a1-m1-cB
6 2qj4-a1-m1-cA 172 82 0.4524 0.2209 0.4634 1.34e-23 2qj4-a1-m1-cA_2qj4-a1-m1-cB
7 7moa-a1-m1-cA 254 82 0.4524 0.1496 0.4634 1.91e-23 7moa-a1-m1-cA_7moa-a1-m1-cD
8 7moa-a1-m1-cA 254 82 0.4762 0.1575 0.4878 1.31e-19 7moa-a1-m1-cA_7moa-a1-m1-cD
9 3sp8-a1-m1-cA 255 82 0.4405 0.1451 0.4512 1.28e-22 3sp8-a1-m1-cA_3sp8-a1-m1-cB
10 3sp8-a1-m1-cA 255 81 0.4643 0.1529 0.4815 1.07e-19 3sp8-a1-m1-cA_3sp8-a1-m1-cB
11 3sp8-a1-m1-cB 256 82 0.4405 0.1445 0.4512 1.35e-22 3sp8-a1-m1-cA_3sp8-a1-m1-cB
12 3sp8-a1-m1-cB 256 81 0.4643 0.1523 0.4815 1.20e-19 3sp8-a1-m1-cA_3sp8-a1-m1-cB
13 7moa-a1-m1-cD 638 82 0.4524 0.0596 0.4634 1.73e-22 7moa-a1-m1-cA_7moa-a1-m1-cD
14 7moa-a1-m1-cD 638 82 0.4643 0.0611 0.4756 2.73e-18 7moa-a1-m1-cA_7moa-a1-m1-cD
15 7moa-a1-m1-cD 638 82 0.4643 0.0611 0.4756 4.88e-17 7moa-a1-m1-cA_7moa-a1-m1-cD
16 7moa-a1-m1-cD 638 85 0.4286 0.0564 0.4235 2.38e-15 7moa-a1-m1-cA_7moa-a1-m1-cD
17 4iua-a9-m1-cF 254 82 0.4524 0.1496 0.4634 2.48e-22 4iua-a9-m1-cA_4iua-a9-m1-cF
18 4iua-a9-m1-cF 254 82 0.4762 0.1575 0.4878 1.58e-19 4iua-a9-m1-cA_4iua-a9-m1-cF
19 4iua-a9-m1-cA 254 82 0.4524 0.1496 0.4634 2.48e-22 4iua-a9-m1-cA_4iua-a9-m1-cF
20 4iua-a9-m1-cA 254 82 0.4762 0.1575 0.4878 1.58e-19 4iua-a9-m1-cA_4iua-a9-m1-cF
21 5fwv-a1-m2-cA 294 89 0.4167 0.1190 0.3933 3.24e-10 5fwv-a1-m1-cA_5fwv-a1-m2-cA
22 5fwv-a1-m1-cA 294 89 0.4167 0.1190 0.3933 3.24e-10 5fwv-a1-m1-cA_5fwv-a1-m2-cA
23 5fws-a1-m2-cA 288 87 0.4167 0.1215 0.4023 5.68e-10 5fws-a1-m1-cA_5fws-a1-m2-cA
24 5fws-a1-m1-cA 288 87 0.4167 0.1215 0.4023 5.68e-10 5fws-a1-m1-cA_5fws-a1-m2-cA
25 2r37-a3-m5-cB 188 49 0.1786 0.0798 0.3061 1.2 2r37-a3-m4-cB_2r37-a3-m5-cB, 2r37-a3-m5-cB_2r37-a3-m2-cA
26 2r37-a3-m4-cB 188 49 0.1786 0.0798 0.3061 1.2 2r37-a3-m4-cB_2r37-a3-m5-cB
27 2r37-a3-m2-cA 191 49 0.1786 0.0785 0.3061 1.2 2r37-a3-m5-cB_2r37-a3-m2-cA
28 6nps-a1-m1-cB 958 25 0.1310 0.0115 0.4400 3.5 6nps-a1-m1-cB_6nps-a1-m1-cA
29 6nps-a1-m1-cA 968 25 0.1310 0.0114 0.4400 3.5 6nps-a1-m1-cB_6nps-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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