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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
DDEDRAQLKARLWIRVEERLQQVLSSEDIKYTPRFINSLLELAYLQLGEGSDLQAFARHA
GRGVVNKSDLLYLRKQPDLQERVTQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3v9r-a1-m1-cC 85 85 1.0000 1.0000 1.0000 2.18e-57 3v9r-a1-m1-cC_3v9r-a1-m1-cA
2 3v9r-a1-m1-cA 86 85 1.0000 0.9884 1.0000 2.35e-57 3v9r-a1-m1-cC_3v9r-a1-m1-cA
3 7da0-a1-m2-cB 95 67 0.2118 0.1895 0.2687 0.098 7da0-a1-m1-cB_7da0-a1-m2-cB
4 7da0-a1-m1-cB 95 67 0.2118 0.1895 0.2687 0.098 7da0-a1-m1-cB_7da0-a1-m2-cB
5 1taf-a2-m5-cA 68 42 0.1412 0.1765 0.2857 0.69 1taf-a2-m4-cA_1taf-a2-m5-cA
6 1taf-a2-m4-cA 68 42 0.1412 0.1765 0.2857 0.69 1taf-a2-m4-cA_1taf-a2-m5-cA
7 2h4q-a2-m6-cA 352 35 0.1176 0.0284 0.2857 9.0 2h4q-a2-m1-cA_2h4q-a2-m6-cA, 2h4q-a2-m2-cA_2h4q-a2-m6-cA, 2h4q-a2-m5-cA_2h4q-a2-m6-cA
8 2h4q-a2-m5-cA 352 35 0.1176 0.0284 0.2857 9.0 2h4q-a2-m5-cA_2h4q-a2-m6-cA
9 2h4q-a2-m2-cA 352 35 0.1176 0.0284 0.2857 9.0 2h4q-a2-m2-cA_2h4q-a2-m6-cA
10 2h4q-a2-m1-cA 352 35 0.1176 0.0284 0.2857 9.0 2h4q-a2-m1-cA_2h4q-a2-m6-cA
11 1mv8-a2-m1-cD 436 51 0.1529 0.0298 0.2549 9.3 1mv8-a2-m1-cC_1mv8-a2-m1-cD
12 1mv8-a2-m1-cC 436 51 0.1529 0.0298 0.2549 9.3 1mv8-a2-m1-cC_1mv8-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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