Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=58)
DDELLYLPVRGRETYEMLLKIKESLELMQYLPQHTIETYRQQQQQQHQHLLQKQTSIQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4a9z-a1-m1-cC 58 58 1.0000 1.0000 1.0000 5.75e-35 4a9z-a1-m1-cB_4a9z-a1-m1-cC
2 2nb1-a1-m1-cC 60 58 0.9828 0.9500 0.9828 1.70e-34 2nb1-a1-m1-cA_2nb1-a1-m1-cC
3 2nb1-a1-m1-cA 60 58 0.9828 0.9500 0.9828 1.70e-34 2nb1-a1-m1-cA_2nb1-a1-m1-cC
4 4a9z-a1-m1-cB 45 45 0.7759 1.0000 1.0000 3.39e-26 4a9z-a1-m1-cB_4a9z-a1-m1-cC
5 7z73-a1-m1-cC 44 44 0.7586 1.0000 1.0000 3.85e-25 7z73-a1-m1-cD_7z73-a1-m1-cC
6 7z73-a1-m1-cD 43 43 0.7414 1.0000 1.0000 4.56e-24 7z73-a1-m1-cD_7z73-a1-m1-cC
7 3zy1-a1-m4-cA 40 40 0.6897 1.0000 1.0000 8.82e-23 3zy1-a1-m1-cA_3zy1-a1-m4-cA, 3zy1-a1-m2-cA_3zy1-a1-m4-cA
8 3zy1-a1-m2-cA 40 40 0.6897 1.0000 1.0000 8.82e-23 3zy1-a1-m2-cA_3zy1-a1-m4-cA
9 3zy1-a1-m1-cA 40 40 0.6897 1.0000 1.0000 8.82e-23 3zy1-a1-m1-cA_3zy1-a1-m4-cA
10 5hob-a1-m1-cC 46 39 0.3621 0.4565 0.5385 2.44e-09 5hob-a1-m1-cB_5hob-a1-m1-cC
11 5hob-a1-m1-cB 45 39 0.3621 0.4667 0.5385 2.47e-09 5hob-a1-m1-cB_5hob-a1-m1-cC
12 2nb1-a1-m1-cD 50 39 0.3448 0.4000 0.5128 3.65e-09 2nb1-a1-m1-cB_2nb1-a1-m1-cD
13 2nb1-a1-m1-cB 50 39 0.3448 0.4000 0.5128 3.65e-09 2nb1-a1-m1-cB_2nb1-a1-m1-cD
14 2wqj-a5-m1-cZ 31 28 0.3276 0.6129 0.6786 1.00e-07 2wqj-a5-m1-c1_2wqj-a5-m1-cZ, 2wqj-a5-m1-c2_2wqj-a5-m1-cZ
15 2wtt-a2-m1-cB 41 39 0.4138 0.5854 0.6154 1.25e-07 2wtt-a2-m1-cA_2wtt-a2-m1-cB
16 3zy0-a1-m1-cD 24 24 0.3966 0.9583 0.9583 2.12e-07 3zy0-a1-m1-cD_3zy0-a1-m1-cB
17 3zy0-a1-m1-cB 25 24 0.3966 0.9200 0.9583 2.46e-07 3zy0-a1-m1-cD_3zy0-a1-m1-cB
18 2wtt-a4-m1-cO 39 38 0.3966 0.5897 0.6053 4.39e-07 2wtt-a4-m1-cM_2wtt-a4-m1-cO
19 2wtt-a2-m1-cA 40 38 0.3966 0.5750 0.6053 4.62e-07 2wtt-a2-m1-cA_2wtt-a2-m1-cB
20 4d1l-a2-m2-cA 38 38 0.3276 0.5000 0.5000 1.89e-06 4d1l-a2-m2-cB_4d1l-a2-m2-cA
21 4d1l-a2-m1-cA 38 38 0.3276 0.5000 0.5000 1.89e-06 4d1l-a2-m2-cB_4d1l-a2-m1-cA
22 2wqj-a5-m1-c2 27 24 0.2931 0.6296 0.7083 4.09e-06 2wqj-a5-m1-c2_2wqj-a5-m1-cZ
23 2wqj-a4-m1-cO 27 24 0.2931 0.6296 0.7083 4.09e-06 2wqj-a4-m1-cO_2wqj-a4-m1-cP
24 2wqj-a1-m1-cJ 27 24 0.2931 0.6296 0.7083 4.09e-06 2wqj-a1-m1-cL_2wqj-a1-m1-cJ
25 2wqj-a4-m1-cP 28 24 0.2931 0.6071 0.7083 4.32e-06 2wqj-a4-m1-cO_2wqj-a4-m1-cP
26 2wqj-a5-m1-c1 26 24 0.2931 0.6538 0.7083 4.38e-06 2wqj-a5-m1-c1_2wqj-a5-m1-cZ
27 2wqj-a1-m1-cL 26 24 0.2931 0.6538 0.7083 4.38e-06 2wqj-a1-m1-cL_2wqj-a1-m1-cJ
28 4d1l-a2-m2-cB 37 37 0.3103 0.4865 0.4865 1.37e-05 4d1l-a2-m2-cB_4d1l-a2-m1-cA, 4d1l-a2-m2-cB_4d1l-a2-m2-cA
29 4cz6-a1-m1-cC 27 25 0.2586 0.5556 0.6000 0.004 4cz6-a1-m1-cC_4cz6-a1-m1-cB
30 4cz6-a1-m1-cB 29 25 0.2586 0.5172 0.6000 0.004 4cz6-a1-m1-cC_4cz6-a1-m1-cB
31 2j10-a1-m1-cC 31 25 0.2069 0.3871 0.4800 0.007 2j10-a1-m1-cB_2j10-a1-m1-cC
32 2j10-a1-m1-cB 31 25 0.2069 0.3871 0.4800 0.007 2j10-a1-m1-cB_2j10-a1-m1-cC
33 1sak-a1-m1-cD 42 27 0.2241 0.3095 0.4815 0.022 1sak-a1-m1-cB_1sak-a1-m1-cD, 1sak-a1-m1-cC_1sak-a1-m1-cD
34 1sak-a1-m1-cC 42 27 0.2241 0.3095 0.4815 0.022 1sak-a1-m1-cC_1sak-a1-m1-cD
35 1sak-a1-m1-cB 42 27 0.2241 0.3095 0.4815 0.022 1sak-a1-m1-cB_1sak-a1-m1-cD
36 1pet-a1-m1-cD 31 25 0.2069 0.3871 0.4800 0.10 1pet-a1-m1-cA_1pet-a1-m1-cD
37 1pet-a1-m1-cA 31 25 0.2069 0.3871 0.4800 0.10 1pet-a1-m1-cA_1pet-a1-m1-cD
38 5xzc-a2-m1-cE 232 25 0.2069 0.0517 0.4800 0.26 5xzc-a2-m1-cC_5xzc-a2-m1-cE
39 5xzc-a2-m1-cD 232 25 0.2069 0.0517 0.4800 0.26 5xzc-a2-m1-cB_5xzc-a2-m1-cD
40 5xzc-a2-m1-cC 232 25 0.2069 0.0517 0.4800 0.26 5xzc-a2-m1-cB_5xzc-a2-m1-cC, 5xzc-a2-m1-cC_5xzc-a2-m1-cE
41 5xzc-a2-m1-cB 232 25 0.2069 0.0517 0.4800 0.26 5xzc-a2-m1-cB_5xzc-a2-m1-cC, 5xzc-a2-m1-cB_5xzc-a2-m1-cD
42 2mw4-a1-m1-cD 47 32 0.1897 0.2340 0.3438 0.29 2mw4-a1-m1-cA_2mw4-a1-m1-cD, 2mw4-a1-m1-cB_2mw4-a1-m1-cD, 2mw4-a1-m1-cC_2mw4-a1-m1-cD
43 2mw4-a1-m1-cC 47 32 0.1897 0.2340 0.3438 0.29 2mw4-a1-m1-cC_2mw4-a1-m1-cD
44 2mw4-a1-m1-cB 47 32 0.1897 0.2340 0.3438 0.29 2mw4-a1-m1-cB_2mw4-a1-m1-cD
45 2mw4-a1-m1-cA 47 32 0.1897 0.2340 0.3438 0.29 2mw4-a1-m1-cA_2mw4-a1-m1-cD
46 1hs5-a1-m1-cB 34 27 0.2069 0.3529 0.4444 0.44 1hs5-a1-m1-cA_1hs5-a1-m1-cB
47 1hs5-a1-m1-cA 34 27 0.2069 0.3529 0.4444 0.44 1hs5-a1-m1-cA_1hs5-a1-m1-cB
48 3q01-a1-m1-cB 233 27 0.2069 0.0515 0.4444 2.5 3q01-a1-m1-cA_3q01-a1-m1-cB
49 3q01-a1-m1-cA 233 27 0.2069 0.0515 0.4444 2.5 3q01-a1-m1-cA_3q01-a1-m1-cB
50 1a1u-a1-m1-cC 29 25 0.1897 0.3793 0.4400 2.8 1a1u-a1-m1-cA_1a1u-a1-m1-cC
51 1a1u-a1-m1-cA 29 25 0.1897 0.3793 0.4400 2.8 1a1u-a1-m1-cA_1a1u-a1-m1-cC
52 7x2u-a1-m1-cA 541 30 0.1379 0.0148 0.2667 7.9 7x2u-a1-m1-cB_7x2u-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600