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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
DDLVFAGNKALYLVLILSGWPTIVATIIGLLVGLFQTVTQLQEQTLPFGIKLLGVCLCLF
LLSGWYGEVLLSYGRQVIFLALA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6q16-a1-m1-c7 84 83 1.0000 0.9881 1.0000 3.00e-53 6q16-a1-m1-c6_6q16-a1-m1-c7
2 7agx-a1-m1-c1H 83 83 1.0000 1.0000 1.0000 4.23e-53 7agx-a1-m1-c1G_7agx-a1-m1-c1H
3 7agx-a1-m1-c1G 73 83 0.8795 1.0000 0.8795 5.74e-42 7agx-a1-m1-c1G_7agx-a1-m1-c1H
4 6r6b-a1-m1-cI 85 80 0.6627 0.6471 0.6875 1.81e-34 6r6b-a1-m1-cH_6r6b-a1-m1-cI
5 6r6b-a1-m1-cH 85 80 0.6627 0.6471 0.6875 1.81e-34 6r6b-a1-m1-cH_6r6b-a1-m1-cI
6 6q16-a1-m1-c6 53 83 0.6265 0.9811 0.6265 6.52e-25 6q16-a1-m1-c6_6q16-a1-m1-c7
7 8axk-a1-m1-cH 75 80 0.5422 0.6000 0.5625 3.24e-23 8axk-a1-m1-cI_8axk-a1-m1-cH
8 8axk-a1-m1-cJ 67 80 0.4819 0.5970 0.5000 3.04e-19 8axk-a1-m1-cI_8axk-a1-m1-cJ
9 8axk-a1-m1-cI 63 80 0.4458 0.5873 0.4625 1.43e-16 8axk-a1-m1-cI_8axk-a1-m1-cH, 8axk-a1-m1-cI_8axk-a1-m1-cJ
10 6s3l-a1-m1-cI 89 71 0.2892 0.2697 0.3380 4.66e-06 6s3l-a1-m1-cH_6s3l-a1-m1-cI
11 6s3l-a1-m1-cH 89 71 0.2892 0.2697 0.3380 4.66e-06 6s3l-a1-m1-cH_6s3l-a1-m1-cI
12 6s3r-a1-m1-cJ 89 66 0.2651 0.2472 0.3333 1.57e-05 6s3r-a1-m1-cI_6s3r-a1-m1-cJ
13 6s3r-a1-m1-cI 89 66 0.2651 0.2472 0.3333 1.57e-05 6s3r-a1-m1-cI_6s3r-a1-m1-cJ
14 4jbb-a1-m2-cA 208 27 0.1325 0.0529 0.4074 0.97 4jbb-a1-m1-cA_4jbb-a1-m2-cA
15 4jbb-a1-m1-cA 208 27 0.1325 0.0529 0.4074 0.97 4jbb-a1-m1-cA_4jbb-a1-m2-cA
16 1w7w-a1-m1-cF 150 28 0.1566 0.0867 0.4643 1.7 1w7w-a1-m1-cD_1w7w-a1-m1-cF, 1w7w-a1-m1-cF_1w7w-a1-m1-cE
17 1w7w-a1-m1-cD 150 28 0.1566 0.0867 0.4643 1.7 1w7w-a1-m1-cD_1w7w-a1-m1-cF
18 1w7w-a1-m1-cE 151 28 0.1566 0.0861 0.4643 1.7 1w7w-a1-m1-cF_1w7w-a1-m1-cE

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Reference:
Jacob Schwartz et al.

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