Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=59)
DDPMSLLYNMNDCYSKLKELVPSIPQNKKVSKMEILQHVIDYILDLQIALDSHLKPSFL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4aya-a1-m1-cA 59 59 1.0000 1.0000 1.0000 4.11e-37 4aya-a1-m1-cB_4aya-a1-m1-cA
2 4aya-a1-m1-cB 48 48 0.8136 1.0000 1.0000 9.38e-29 4aya-a1-m1-cB_4aya-a1-m1-cA
3 6u2u-a1-m1-cA 46 46 0.5932 0.7609 0.7609 3.82e-21 6u2u-a1-m1-cB_6u2u-a1-m1-cA
4 6u2u-a1-m1-cB 44 44 0.5763 0.7727 0.7727 2.58e-20 6u2u-a1-m1-cB_6u2u-a1-m1-cA
5 2lfh-a1-m1-cB 68 49 0.4915 0.4265 0.5918 1.34e-17 2lfh-a1-m1-cA_2lfh-a1-m1-cB
6 2lfh-a1-m1-cA 68 49 0.4915 0.4265 0.5918 1.34e-17 2lfh-a1-m1-cA_2lfh-a1-m1-cB
7 7eod-a2-m1-cC 66 40 0.2712 0.2424 0.4000 0.066 7eod-a2-m1-cC_7eod-a2-m1-cD
8 2ql2-a3-m1-cB 59 46 0.2373 0.2373 0.3043 0.14 2ql2-a3-m1-cD_2ql2-a3-m1-cB
9 7d8s-a2-m1-cD 175 40 0.2542 0.0857 0.3750 0.16 7d8s-a2-m1-cD_7d8s-a2-m1-cC
10 2ql2-a3-m1-cD 57 40 0.2034 0.2105 0.3000 0.22 2ql2-a3-m1-cD_2ql2-a3-m1-cB
11 7vbg-a1-m1-cB 67 36 0.1695 0.1493 0.2778 1.7 7vbg-a1-m1-cA_7vbg-a1-m1-cB
12 7vbg-a1-m1-cA 67 36 0.1695 0.1493 0.2778 1.7 7vbg-a1-m1-cA_7vbg-a1-m1-cB
13 4l6y-a1-m1-cB 432 36 0.1695 0.0231 0.2778 2.2 4l6y-a1-m1-cB_4l6y-a1-m1-cA
14 4l6y-a1-m1-cA 445 36 0.1695 0.0225 0.2778 2.3 4l6y-a1-m1-cB_4l6y-a1-m1-cA
15 5i4z-a1-m1-cB 74 31 0.1864 0.1486 0.3548 3.3 5i4z-a1-m1-cA_5i4z-a1-m1-cB
16 5i4z-a1-m1-cA 74 31 0.1864 0.1486 0.3548 3.3 5i4z-a1-m1-cA_5i4z-a1-m1-cB
17 3omv-a1-m1-cB 264 27 0.2203 0.0492 0.4815 3.9 3omv-a1-m1-cA_3omv-a1-m1-cB
18 3omv-a1-m1-cA 264 27 0.2203 0.0492 0.4815 3.9 3omv-a1-m1-cA_3omv-a1-m1-cB
19 8bd7-a1-m1-cK 619 33 0.1695 0.0162 0.3030 4.7 8bd7-a1-m1-cC_8bd7-a1-m1-cK
20 8bd7-a1-m1-cC 619 33 0.1695 0.0162 0.3030 4.7 8bd7-a1-m1-cC_8bd7-a1-m1-cK

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600