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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
DDSEQLQMELKELALEEERLIQELEDVEKNRKIVAENLEKVQAEAERLDQEEAQYQREYS
EFKRQQLELDDELKSVENQMRYAQTQLDKLKLE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5hhe-a1-m2-cD 93 93 1.0000 1.0000 1.0000 5.58e-57 5hhe-a1-m1-cD_5hhe-a1-m2-cD
2 5hhe-a1-m1-cD 93 93 1.0000 1.0000 1.0000 5.58e-57 5hhe-a1-m1-cD_5hhe-a1-m2-cD
3 5k7b-a1-m1-cB 91 86 0.5269 0.5385 0.5698 1.03e-16 5k7b-a1-m1-cA_5k7b-a1-m1-cB
4 5k7b-a1-m1-cA 87 85 0.5161 0.5517 0.5647 4.70e-16 5k7b-a1-m1-cA_5k7b-a1-m1-cB
5 2xzr-a1-m3-cA 108 73 0.1720 0.1481 0.2192 0.057 2xzr-a1-m2-cA_2xzr-a1-m3-cA
6 2xzr-a1-m2-cA 108 73 0.1720 0.1481 0.2192 0.057 2xzr-a1-m2-cA_2xzr-a1-m3-cA
7 2efk-a1-m2-cA 267 63 0.2366 0.0824 0.3492 0.062 2efk-a1-m1-cA_2efk-a1-m2-cA
8 2efk-a1-m1-cA 267 63 0.2366 0.0824 0.3492 0.062 2efk-a1-m1-cA_2efk-a1-m2-cA
9 2d3e-a1-m1-cD 130 59 0.2043 0.1462 0.3220 1.1 2d3e-a1-m1-cA_2d3e-a1-m1-cD, 2d3e-a1-m1-cB_2d3e-a1-m1-cD
10 2d3e-a1-m1-cC 130 59 0.2043 0.1462 0.3220 1.1 2d3e-a1-m1-cA_2d3e-a1-m1-cC
11 2d3e-a1-m1-cB 130 59 0.2043 0.1462 0.3220 1.1 2d3e-a1-m1-cA_2d3e-a1-m1-cB, 2d3e-a1-m1-cB_2d3e-a1-m1-cD
12 2d3e-a1-m1-cA 130 59 0.2043 0.1462 0.3220 1.1 2d3e-a1-m1-cA_2d3e-a1-m1-cB, 2d3e-a1-m1-cA_2d3e-a1-m1-cC, 2d3e-a1-m1-cA_2d3e-a1-m1-cD
13 3zih-a1-m1-cB 80 42 0.1613 0.1875 0.3571 6.7 3zih-a1-m1-cA_3zih-a1-m1-cB
14 3zih-a1-m1-cA 79 42 0.1613 0.1899 0.3571 6.9 3zih-a1-m1-cA_3zih-a1-m1-cB
15 7cpy-a1-m1-cB 2262 26 0.1290 0.0053 0.4615 7.5 7cpy-a1-m1-cA_7cpy-a1-m1-cB
16 7cpy-a1-m1-cA 2262 26 0.1290 0.0053 0.4615 7.5 7cpy-a1-m1-cA_7cpy-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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