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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
DDVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDV
QKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQVKSSP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4qu6-a2-m2-cA 99 99 1.0000 1.0000 1.0000 1.63e-71 4qu6-a2-m1-cA_4qu6-a2-m2-cA
2 4qu6-a2-m1-cA 99 99 1.0000 1.0000 1.0000 1.63e-71 4qu6-a2-m1-cA_4qu6-a2-m2-cA
3 5uzg-a1-m1-cA 90 88 0.3232 0.3556 0.3636 3.33e-20 5uzg-a1-m1-cB_5uzg-a1-m1-cA
4 5uzg-a1-m1-cB 84 86 0.2828 0.3333 0.3256 2.51e-16 5uzg-a1-m1-cB_5uzg-a1-m1-cA
5 7vkj-a1-m1-cE 101 86 0.3131 0.3069 0.3605 5.65e-15 7vkj-a1-m1-cE_7vkj-a1-m1-cA
6 7vkj-a1-m1-cG 104 86 0.3131 0.2981 0.3605 7.23e-15 7vkj-a1-m1-cF_7vkj-a1-m1-cG
7 7vkj-a1-m1-cF 104 86 0.3131 0.2981 0.3605 7.23e-15 7vkj-a1-m1-cF_7vkj-a1-m1-cG
8 7vkj-a1-m1-cD 104 86 0.3131 0.2981 0.3605 7.23e-15 7vkj-a1-m1-cC_7vkj-a1-m1-cD
9 7vkj-a1-m1-cC 104 86 0.3131 0.2981 0.3605 7.23e-15 7vkj-a1-m1-cC_7vkj-a1-m1-cD
10 7vkj-a1-m1-cA 104 86 0.3131 0.2981 0.3605 7.23e-15 7vkj-a1-m1-cE_7vkj-a1-m1-cA
11 7mo6-a1-m1-cA 518 32 0.1111 0.0212 0.3438 0.73 7mo6-a1-m1-cA_7mo6-a1-m2-cB
12 7mo6-a1-m2-cB 535 32 0.1111 0.0206 0.3438 0.73 7mo6-a1-m1-cA_7mo6-a1-m2-cB
13 7mft-a1-m6-cG 1483 73 0.2323 0.0155 0.3151 0.98 7mft-a1-m2-cG_7mft-a1-m6-cG
14 7mft-a1-m2-cG 1483 73 0.2323 0.0155 0.3151 0.98 7mft-a1-m2-cG_7mft-a1-m6-cG
15 3zyy-a1-m1-cY 522 51 0.1818 0.0345 0.3529 9.2 3zyy-a1-m1-cY_3zyy-a1-m1-cX

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Reference:
Jacob Schwartz et al.

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