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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
DEIVQREDGSWLVDGVSLDRFREFFELEAPLPGEAGGNIHTLAGVLYQLGRVPSVTDRFE
WNGFSFEVVDDRTRVDKILVQRH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ded-a2-m1-cD 83 83 1.0000 1.0000 1.0000 2.44e-56 3ded-a2-m1-cD_3ded-a2-m1-cC
2 3ded-a2-m1-cC 88 83 1.0000 0.9432 1.0000 4.26e-56 3ded-a2-m1-cD_3ded-a2-m1-cC
3 2pls-a6-m2-cL 83 80 0.4096 0.4096 0.4250 6.32e-15 2pls-a6-m1-cL_2pls-a6-m2-cL
4 2pls-a6-m1-cL 83 80 0.4096 0.4096 0.4250 6.32e-15 2pls-a6-m1-cL_2pls-a6-m2-cL
5 2pls-a1-m1-cC 83 80 0.4096 0.4096 0.4250 6.32e-15 2pls-a1-m1-cB_2pls-a1-m1-cC
6 2pls-a1-m1-cB 83 80 0.4096 0.4096 0.4250 6.32e-15 2pls-a1-m1-cB_2pls-a1-m1-cC
7 2oai-a1-m2-cA 77 84 0.4096 0.4416 0.4048 1.35e-12 2oai-a1-m1-cA_2oai-a1-m2-cA
8 2oai-a1-m1-cA 77 84 0.4096 0.4416 0.4048 1.35e-12 2oai-a1-m1-cA_2oai-a1-m2-cA
9 2p13-a1-m1-cA 84 80 0.3012 0.2976 0.3125 0.003 2p13-a1-m1-cB_2p13-a1-m1-cA
10 2p13-a1-m1-cB 82 80 0.2892 0.2927 0.3000 0.003 2p13-a1-m1-cB_2p13-a1-m1-cA
11 6dcl-a1-m1-cB 171 44 0.1687 0.0819 0.3182 0.14 6dcl-a1-m1-cB_6dcl-a1-m1-cA
12 6dcl-a1-m1-cA 182 49 0.2048 0.0934 0.3469 1.1 6dcl-a1-m1-cB_6dcl-a1-m1-cA
13 2bqq-a1-m2-cA 96 36 0.1928 0.1667 0.4444 1.3 2bqq-a1-m1-cA_2bqq-a1-m2-cA
14 2bqq-a1-m1-cA 96 36 0.1928 0.1667 0.4444 1.3 2bqq-a1-m1-cA_2bqq-a1-m2-cA
15 6kse-a1-m1-cB 607 43 0.2048 0.0280 0.3953 2.3 6kse-a1-m1-cA_6kse-a1-m1-cB
16 6kse-a1-m1-cA 607 43 0.2048 0.0280 0.3953 2.3 6kse-a1-m1-cA_6kse-a1-m1-cB
17 7lvt-a1-m1-cD 719 39 0.1566 0.0181 0.3333 2.5 7lvt-a1-m1-cA_7lvt-a1-m1-cD, 7lvt-a1-m1-cB_7lvt-a1-m1-cD, 7lvt-a1-m1-cC_7lvt-a1-m1-cD
18 7lvt-a1-m1-cC 719 39 0.1566 0.0181 0.3333 2.5 7lvt-a1-m1-cC_7lvt-a1-m1-cD
19 7lvt-a1-m1-cB 719 39 0.1566 0.0181 0.3333 2.5 7lvt-a1-m1-cB_7lvt-a1-m1-cD
20 7lvt-a1-m1-cA 719 39 0.1566 0.0181 0.3333 2.5 7lvt-a1-m1-cA_7lvt-a1-m1-cD
21 5yx3-a1-m1-cB 214 34 0.1446 0.0561 0.3529 4.9 5yx3-a1-m1-cA_5yx3-a1-m1-cB
22 5yx3-a1-m1-cA 214 34 0.1446 0.0561 0.3529 4.9 5yx3-a1-m1-cA_5yx3-a1-m1-cB
23 7wm3-a2-m1-cD 179 49 0.1928 0.0894 0.3265 6.5 7wm3-a2-m1-cB_7wm3-a2-m1-cD
24 7wm3-a2-m1-cB 179 49 0.1928 0.0894 0.3265 6.5 7wm3-a2-m1-cB_7wm3-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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