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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
DENCGICRMAFNGCCPDCKVPGDDCPLVWGQCSHCFHMHCILKWLHAQQVQQHCPMCRQE
WKFKE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4r2y-a6-m3-cC 65 65 1.0000 1.0000 1.0000 6.03e-44 4r2y-a6-m1-cC_4r2y-a6-m3-cC, 4r2y-a6-m3-cD_4r2y-a6-m3-cC
2 4r2y-a6-m1-cC 65 65 1.0000 1.0000 1.0000 6.03e-44 4r2y-a6-m1-cC_4r2y-a6-m3-cC, 4r2y-a6-m3-cD_4r2y-a6-m1-cC
3 4r2y-a6-m3-cD 62 65 0.9538 1.0000 0.9538 2.49e-39 4r2y-a6-m3-cD_4r2y-a6-m1-cC, 4r2y-a6-m3-cD_4r2y-a6-m3-cC
4 1ldk-a2-m2-cC 88 69 0.4000 0.2955 0.3768 4.72e-12 1ldk-a2-m1-cC_1ldk-a2-m2-cC
5 1ldk-a2-m1-cC 88 69 0.4000 0.2955 0.3768 4.72e-12 1ldk-a2-m1-cC_1ldk-a2-m2-cC
6 3dqv-a3-m1-cY 84 69 0.4154 0.3214 0.3913 1.94e-11 3dqv-a3-m1-cY_3dqv-a3-m2-cR
7 3dqv-a3-m2-cR 85 68 0.3846 0.2941 0.3676 2.63e-11 3dqv-a3-m1-cY_3dqv-a3-m2-cR
8 4whv-a2-m1-cJ 101 37 0.2000 0.1287 0.3514 2.1 4whv-a2-m1-cI_4whv-a2-m1-cJ
9 4whv-a2-m1-cI 101 37 0.2000 0.1287 0.3514 2.1 4whv-a2-m1-cI_4whv-a2-m1-cJ
10 4ayc-a1-m1-cA 136 37 0.2000 0.0956 0.3514 3.1 4ayc-a1-m2-cB_4ayc-a1-m1-cA
11 7zj3-a2-m1-cA 86 34 0.1692 0.1279 0.3235 3.1 7zj3-a2-m1-cG_7zj3-a2-m1-cA
12 2q4t-a1-m1-cB 283 28 0.1692 0.0389 0.3929 3.4 2q4t-a1-m1-cA_2q4t-a1-m1-cB
13 2q4t-a1-m1-cA 283 28 0.1692 0.0389 0.3929 3.4 2q4t-a1-m1-cA_2q4t-a1-m1-cB
14 7zj3-a2-m1-cG 85 34 0.1692 0.1294 0.3235 3.4 7zj3-a2-m1-cG_7zj3-a2-m1-cA
15 4ayc-a1-m2-cB 126 37 0.2000 0.1032 0.3514 3.7 4ayc-a1-m2-cB_4ayc-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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