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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
DEQSVESIAEVFRCFICEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRE
LVNCRWAEEVTQQLDTLQLC

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3lrq-a2-m1-cC 80 80 1.0000 1.0000 1.0000 7.60e-53 3lrq-a2-m1-cB_3lrq-a2-m1-cC
2 3lrq-a2-m1-cB 78 77 0.9625 0.9872 1.0000 9.20e-51 3lrq-a2-m1-cB_3lrq-a2-m1-cC
3 2y43-a1-m1-cB 88 72 0.3000 0.2727 0.3333 1.85e-05 2y43-a1-m1-cA_2y43-a1-m1-cB
4 2y43-a1-m1-cA 88 72 0.3000 0.2727 0.3333 2.03e-05 2y43-a1-m1-cA_2y43-a1-m1-cB
5 3ztg-a1-m1-cB 92 50 0.2125 0.1848 0.3400 2.5 3ztg-a1-m1-cA_3ztg-a1-m1-cB
6 3ztg-a1-m1-cA 92 50 0.2125 0.1848 0.3400 2.5 3ztg-a1-m1-cA_3ztg-a1-m1-cB
7 4whv-a2-m1-cJ 101 46 0.1500 0.1188 0.2609 2.8 4whv-a2-m1-cI_4whv-a2-m1-cJ
8 4whv-a2-m1-cI 101 46 0.1500 0.1188 0.2609 2.8 4whv-a2-m1-cI_4whv-a2-m1-cJ
9 4ayc-a1-m2-cB 126 46 0.1500 0.0952 0.2609 5.1 4ayc-a1-m2-cB_4ayc-a1-m1-cA
10 4ayc-a1-m1-cA 136 46 0.1500 0.0882 0.2609 5.1 4ayc-a1-m2-cB_4ayc-a1-m1-cA
11 7p0h-a2-m1-cD 409 23 0.1250 0.0244 0.4348 5.4 7p0h-a2-m1-cB_7p0h-a2-m1-cD
12 7p0h-a2-m1-cB 409 23 0.1250 0.0244 0.4348 5.4 7p0h-a2-m1-cB_7p0h-a2-m1-cD
13 1rmd-a1-m2-cA 116 44 0.2000 0.1379 0.3636 5.7 1rmd-a1-m1-cA_1rmd-a1-m2-cA
14 1rmd-a1-m1-cA 116 44 0.2000 0.1379 0.3636 5.7 1rmd-a1-m1-cA_1rmd-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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