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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=25)
DESWLVPYADILTLLLALFIVLYAS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6ysl-a1-m1-cA 26 25 1.0000 0.9615 1.0000 9.73e-11 6ysl-a1-m1-cB_6ysl-a1-m1-cA
2 6ysl-a1-m1-cB 25 25 1.0000 1.0000 1.0000 1.09e-10 6ysl-a1-m1-cB_6ysl-a1-m1-cA
3 6ykr-a1-m1-cG 26 22 0.6000 0.5769 0.6818 3.84e-04 6ykr-a1-m1-cF_6ykr-a1-m1-cG
4 6ykr-a1-m1-cF 25 22 0.6000 0.6000 0.6818 3.85e-04 6ykr-a1-m1-cF_6ykr-a1-m1-cG
5 1tlt-a1-m2-cB 305 16 0.4000 0.0328 0.6250 0.73 1tlt-a1-m1-cA_1tlt-a1-m2-cB, 1tlt-a1-m1-cB_1tlt-a1-m2-cB, 1tlt-a1-m2-cA_1tlt-a1-m2-cB
6 1tlt-a1-m1-cB 305 16 0.4000 0.0328 0.6250 0.73 1tlt-a1-m1-cB_1tlt-a1-m2-cB
7 1tlt-a1-m2-cA 304 16 0.4000 0.0329 0.6250 0.73 1tlt-a1-m2-cA_1tlt-a1-m2-cB
8 1tlt-a1-m1-cA 304 16 0.4000 0.0329 0.6250 0.73 1tlt-a1-m1-cA_1tlt-a1-m2-cB
9 1si8-a1-m1-cD 474 17 0.3600 0.0190 0.5294 7.9 1si8-a1-m1-cA_1si8-a1-m1-cD, 1si8-a1-m1-cB_1si8-a1-m1-cD, 1si8-a1-m1-cC_1si8-a1-m1-cD
10 1si8-a1-m1-cC 474 17 0.3600 0.0190 0.5294 7.9 1si8-a1-m1-cC_1si8-a1-m1-cD
11 1si8-a1-m1-cB 474 17 0.3600 0.0190 0.5294 7.9 1si8-a1-m1-cB_1si8-a1-m1-cD
12 1si8-a1-m1-cA 474 17 0.3600 0.0190 0.5294 7.9 1si8-a1-m1-cA_1si8-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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