Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=34)
DFKDLWTKLKECHDREVQGLQVKVTKLKQERILD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4d2h-a2-m1-cC 34 34 1.0000 1.0000 1.0000 2.22e-18 4d2h-a2-m1-cD_4d2h-a2-m1-cC
2 4d2h-a1-m1-cH 33 33 0.9706 1.0000 1.0000 1.27e-17 4d2h-a1-m1-cE_4d2h-a1-m1-cH
3 4d2h-a2-m1-cB 32 31 0.9118 0.9688 1.0000 2.08e-16 4d2h-a2-m1-cD_4d2h-a2-m1-cB
4 4d2h-a2-m1-cD 30 30 0.8824 1.0000 1.0000 1.69e-15 4d2h-a2-m1-cD_4d2h-a2-m1-cB, 4d2h-a2-m1-cD_4d2h-a2-m1-cC
5 4d2h-a1-m1-cE 30 30 0.8824 1.0000 1.0000 1.69e-15 4d2h-a1-m1-cE_4d2h-a1-m1-cH
6 7bgf-a1-m1-cB 108 22 0.6471 0.2037 1.0000 9.99e-09 7bgf-a1-m1-cB_7bgf-a1-m1-cA
7 7bgf-a1-m1-cA 112 22 0.6471 0.1964 1.0000 1.15e-08 7bgf-a1-m1-cB_7bgf-a1-m1-cA
8 5brd-a1-m1-cB 367 22 0.2647 0.0245 0.4091 3.4 5brd-a1-m1-cA_5brd-a1-m1-cB
9 5brd-a1-m1-cA 367 22 0.2647 0.0245 0.4091 3.4 5brd-a1-m1-cA_5brd-a1-m1-cB
10 3ln3-a2-m2-cA 287 35 0.4118 0.0488 0.4000 6.3 3ln3-a2-m1-cA_3ln3-a2-m2-cA
11 3ln3-a2-m1-cA 287 35 0.4118 0.0488 0.4000 6.3 3ln3-a2-m1-cA_3ln3-a2-m2-cA
12 4whb-a2-m2-cH 459 18 0.2353 0.0174 0.4444 6.7 4whb-a2-m1-cF_4whb-a2-m2-cH, 4whb-a2-m2-cC_4whb-a2-m2-cH
13 4whb-a2-m2-cC 459 18 0.2353 0.0174 0.4444 6.7 4whb-a2-m2-cC_4whb-a2-m2-cH
14 4whb-a2-m1-cF 459 18 0.2353 0.0174 0.4444 6.7 4whb-a2-m1-cF_4whb-a2-m2-cH

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600