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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=44)
DFKKLYEQILAENEKLKAQLHDTNMELTDLKLQLEKATQRQERF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5huz-a1-m1-cB 44 44 1.0000 1.0000 1.0000 3.50e-25 5huz-a1-m1-cA_5huz-a1-m1-cB
2 5huz-a1-m1-cA 44 44 1.0000 1.0000 1.0000 3.50e-25 5huz-a1-m1-cA_5huz-a1-m1-cB
3 3lm8-a6-m1-cD 210 41 0.3409 0.0714 0.3659 1.1 3lm8-a6-m1-cD_3lm8-a6-m1-cB
4 6lk3-a1-m1-cA 72 44 0.3864 0.2361 0.3864 4.9 6lk3-a1-m1-cA_6lk3-a1-m1-cB
5 6lk3-a1-m1-cB 79 43 0.3864 0.2152 0.3953 5.4 6lk3-a1-m1-cA_6lk3-a1-m1-cB
6 2yy0-a3-m3-cA 38 20 0.2500 0.2895 0.5500 6.3 2yy0-a3-m3-cC_2yy0-a3-m3-cA
7 2yy0-a3-m2-cA 38 20 0.2500 0.2895 0.5500 6.3 2yy0-a3-m2-cA_2yy0-a3-m3-cD
8 2yy0-a3-m3-cC 37 20 0.2500 0.2973 0.5500 6.7 2yy0-a3-m3-cC_2yy0-a3-m3-cA, 2yy0-a3-m3-cC_2yy0-a3-m3-cD
9 2yy0-a3-m3-cD 53 20 0.2500 0.2075 0.5500 7.8 2yy0-a3-m2-cA_2yy0-a3-m3-cD, 2yy0-a3-m2-cD_2yy0-a3-m3-cD, 2yy0-a3-m3-cC_2yy0-a3-m3-cD
10 2yy0-a3-m2-cD 53 20 0.2500 0.2075 0.5500 7.8 2yy0-a3-m2-cD_2yy0-a3-m3-cD
11 8bfn-a1-m1-cG 597 17 0.2273 0.0168 0.5882 8.7 8bfn-a1-m1-cF_8bfn-a1-m1-cG
12 8bfn-a1-m1-cF 597 17 0.2273 0.0168 0.5882 8.7 8bfn-a1-m1-cF_8bfn-a1-m1-cG

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Reference:
Jacob Schwartz et al.

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