Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
DFSKSIVGRIGSEFTEHTSANNRYLKYSIASQPRRDGQTNWYNITVFNEPQINFLTEYVR
KGALVYVEADAANYVGTTLSLVQKDINLLKNGK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6cqo-a1-m1-cA 93 93 1.0000 1.0000 1.0000 8.50e-66 6cqo-a1-m1-cG_6cqo-a1-m1-cA
2 6cqo-a1-m1-cG 87 93 0.9247 0.9885 0.9247 4.71e-56 6cqo-a1-m1-cG_6cqo-a1-m1-cA
3 6cqk-a1-m1-cB 93 96 0.9570 0.9570 0.9271 1.24e-54 6cqk-a1-m1-cD_6cqk-a1-m1-cB
4 6cqk-a1-m1-cD 87 92 0.8925 0.9540 0.9022 1.34e-51 6cqk-a1-m1-cD_6cqk-a1-m1-cB
5 3pgz-a1-m1-cA 109 35 0.1398 0.1193 0.3714 1.39e-04 3pgz-a1-m1-cA_3pgz-a1-m1-cB
6 3pgz-a1-m1-cB 114 35 0.1398 0.1140 0.3714 1.55e-04 3pgz-a1-m1-cA_3pgz-a1-m1-cB
7 3ulp-a1-m1-cD 113 71 0.2043 0.1681 0.2676 0.002 3ulp-a1-m1-cD_3ulp-a1-m1-cA, 3ulp-a1-m1-cD_3ulp-a1-m1-cB, 3ulp-a1-m1-cD_3ulp-a1-m1-cC
8 3ulp-a1-m1-cB 114 72 0.2043 0.1667 0.2639 0.002 3ulp-a1-m1-cD_3ulp-a1-m1-cB
9 3ulp-a1-m1-cA 114 73 0.2151 0.1754 0.2740 0.003 3ulp-a1-m1-cD_3ulp-a1-m1-cA
10 3ulp-a1-m1-cC 116 73 0.2151 0.1724 0.2740 0.003 3ulp-a1-m1-cD_3ulp-a1-m1-cC
11 3lgj-a1-m1-cA 95 32 0.1183 0.1158 0.3438 0.14 3lgj-a1-m1-cA_3lgj-a1-m1-cB
12 3lgj-a1-m1-cB 97 32 0.1183 0.1134 0.3438 0.15 3lgj-a1-m1-cA_3lgj-a1-m1-cB
13 4mz9-a1-m1-cD 114 32 0.1290 0.1053 0.3750 0.17 4mz9-a1-m1-cB_4mz9-a1-m1-cD, 4mz9-a1-m1-cC_4mz9-a1-m1-cD
14 4mz9-a1-m1-cC 114 32 0.1290 0.1053 0.3750 0.17 4mz9-a1-m1-cB_4mz9-a1-m1-cC, 4mz9-a1-m1-cC_4mz9-a1-m1-cD
15 4mz9-a1-m1-cB 114 32 0.1290 0.1053 0.3750 0.17 4mz9-a1-m1-cB_4mz9-a1-m1-cC, 4mz9-a1-m1-cB_4mz9-a1-m1-cD
16 2dud-a2-m2-cB 92 64 0.1828 0.1848 0.2656 0.17 2dud-a2-m2-cB_2dud-a2-m1-cA, 2dud-a2-m2-cB_2dud-a2-m2-cA
17 1kaw-a1-m1-cD 96 32 0.1290 0.1250 0.3750 0.19 1kaw-a1-m1-cC_1kaw-a1-m1-cD
18 1kaw-a1-m1-cC 96 32 0.1290 0.1250 0.3750 0.19 1kaw-a1-m1-cA_1kaw-a1-m1-cC, 1kaw-a1-m1-cC_1kaw-a1-m1-cD
19 1kaw-a1-m1-cA 96 32 0.1290 0.1250 0.3750 0.19 1kaw-a1-m1-cA_1kaw-a1-m1-cC
20 1sru-a1-m1-cC 96 32 0.1290 0.1250 0.3750 0.24 1sru-a1-m1-cC_1sru-a1-m1-cA
21 7f25-a1-m1-cB 106 55 0.1935 0.1698 0.3273 0.25 7f25-a1-m1-cA_7f25-a1-m1-cB
22 7f25-a1-m1-cA 106 55 0.1935 0.1698 0.3273 0.25 7f25-a1-m1-cA_7f25-a1-m1-cB
23 1sru-a1-m1-cD 101 32 0.1290 0.1188 0.3750 0.26 1sru-a1-m1-cA_1sru-a1-m1-cD
24 1sru-a1-m1-cA 100 32 0.1290 0.1200 0.3750 0.27 1sru-a1-m1-cA_1sru-a1-m1-cD, 1sru-a1-m1-cC_1sru-a1-m1-cA
25 2dud-a2-m2-cA 95 65 0.1935 0.1895 0.2769 0.32 2dud-a2-m2-cB_2dud-a2-m2-cA
26 2dud-a2-m1-cA 95 65 0.1935 0.1895 0.2769 0.32 2dud-a2-m2-cB_2dud-a2-m1-cA
27 3tqy-a1-m1-cD 96 32 0.1290 0.1250 0.3750 0.44 3tqy-a1-m1-cD_3tqy-a1-m1-cC
28 3tqy-a1-m1-cC 106 32 0.1290 0.1132 0.3750 0.51 3tqy-a1-m1-cD_3tqy-a1-m1-cC
29 7f5y-a1-m2-cA 109 71 0.2151 0.1835 0.2817 0.53 7f5y-a1-m2-cA_7f5y-a1-m2-cB
30 3eiv-a2-m1-cB 111 43 0.1398 0.1171 0.3023 0.87 3eiv-a2-m1-cA_3eiv-a2-m1-cB
31 3ic9-a2-m1-cD 469 39 0.1613 0.0320 0.3846 0.91 3ic9-a2-m1-cD_3ic9-a2-m1-cC
32 3ic9-a2-m1-cC 471 39 0.1613 0.0318 0.3846 0.95 3ic9-a2-m1-cD_3ic9-a2-m1-cC
33 2ztu-a1-m1-cA 235 43 0.1398 0.0553 0.3023 2.2 2ztu-a1-m1-cB_2ztu-a1-m1-cA
34 2ztu-a1-m1-cB 207 43 0.1398 0.0628 0.3023 2.4 2ztu-a1-m1-cB_2ztu-a1-m1-cA
35 6zp1-a1-m1-cC 1017 41 0.1720 0.0157 0.3902 2.9 6zp1-a1-m1-cB_6zp1-a1-m1-cC
36 6zp1-a1-m1-cB 1017 41 0.1720 0.0157 0.3902 2.9 6zp1-a1-m1-cB_6zp1-a1-m1-cC
37 5txr-a1-m1-cB 476 42 0.1398 0.0273 0.3095 4.3 5txr-a1-m1-cB_5txr-a1-m1-cA
38 8as5-a1-m1-cE 97 34 0.1613 0.1546 0.4412 4.9 8as5-a1-m1-cA_8as5-a1-m1-cE
39 7c9b-a1-m2-cA 233 42 0.1398 0.0558 0.3095 9.0 7c9b-a1-m1-cA_7c9b-a1-m2-cA
40 7c9b-a1-m1-cA 233 42 0.1398 0.0558 0.3095 9.0 7c9b-a1-m1-cA_7c9b-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600