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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
DFSKSIVGRIGSEFTEHYLKYSIASQPRRDGQTNWYNITVFNEPQINFLTEYVRKGALVY
VEADAANYVFGTTLSLVQKDINLLKNG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6cqo-a1-m1-cG 87 87 1.0000 1.0000 1.0000 2.71e-61 6cqo-a1-m1-cG_6cqo-a1-m1-cA
2 6cqo-a1-m1-cA 93 93 0.9885 0.9247 0.9247 4.41e-56 6cqo-a1-m1-cG_6cqo-a1-m1-cA
3 6cqk-a1-m1-cB 93 96 0.9655 0.9032 0.8750 2.73e-50 6cqk-a1-m1-cD_6cqk-a1-m1-cB
4 6cqk-a1-m1-cD 87 90 0.9425 0.9425 0.9111 3.08e-49 6cqk-a1-m1-cD_6cqk-a1-m1-cB
5 3pgz-a1-m1-cA 109 35 0.1494 0.1193 0.3714 1.27e-04 3pgz-a1-m1-cA_3pgz-a1-m1-cB
6 3pgz-a1-m1-cB 114 35 0.1494 0.1140 0.3714 1.49e-04 3pgz-a1-m1-cA_3pgz-a1-m1-cB
7 3ulp-a1-m1-cD 113 71 0.2299 0.1770 0.2817 0.005 3ulp-a1-m1-cD_3ulp-a1-m1-cA, 3ulp-a1-m1-cD_3ulp-a1-m1-cB, 3ulp-a1-m1-cD_3ulp-a1-m1-cC
8 3ulp-a1-m1-cB 114 72 0.2299 0.1754 0.2778 0.007 3ulp-a1-m1-cD_3ulp-a1-m1-cB
9 3ulp-a1-m1-cA 114 32 0.1264 0.0965 0.3438 0.009 3ulp-a1-m1-cD_3ulp-a1-m1-cA
10 3ulp-a1-m1-cC 116 73 0.2414 0.1810 0.2877 0.009 3ulp-a1-m1-cD_3ulp-a1-m1-cC
11 7f25-a1-m1-cB 106 67 0.2299 0.1887 0.2985 0.033 7f25-a1-m1-cA_7f25-a1-m1-cB
12 7f25-a1-m1-cA 106 67 0.2299 0.1887 0.2985 0.033 7f25-a1-m1-cA_7f25-a1-m1-cB
13 1kaw-a1-m1-cD 96 59 0.1954 0.1771 0.2881 0.050 1kaw-a1-m1-cC_1kaw-a1-m1-cD
14 1kaw-a1-m1-cC 96 59 0.1954 0.1771 0.2881 0.050 1kaw-a1-m1-cA_1kaw-a1-m1-cC, 1kaw-a1-m1-cC_1kaw-a1-m1-cD
15 1kaw-a1-m1-cA 96 59 0.1954 0.1771 0.2881 0.050 1kaw-a1-m1-cA_1kaw-a1-m1-cC
16 5b4t-a1-m4-cA 260 55 0.1954 0.0654 0.3091 0.077 5b4t-a1-m1-cA_5b4t-a1-m4-cA, 5b4t-a1-m2-cA_5b4t-a1-m4-cA, 5b4t-a1-m3-cA_5b4t-a1-m4-cA
17 5b4t-a1-m3-cA 260 55 0.1954 0.0654 0.3091 0.077 5b4t-a1-m3-cA_5b4t-a1-m4-cA
18 5b4t-a1-m2-cA 260 55 0.1954 0.0654 0.3091 0.077 5b4t-a1-m2-cA_5b4t-a1-m4-cA
19 5b4t-a1-m1-cA 260 55 0.1954 0.0654 0.3091 0.077 5b4t-a1-m1-cA_5b4t-a1-m4-cA
20 2ztu-a1-m1-cA 235 43 0.1494 0.0553 0.3023 0.085 2ztu-a1-m1-cB_2ztu-a1-m1-cA
21 2ztu-a1-m1-cB 207 43 0.1494 0.0628 0.3023 0.099 2ztu-a1-m1-cB_2ztu-a1-m1-cA
22 3lgj-a1-m1-cA 95 32 0.1264 0.1158 0.3438 0.14 3lgj-a1-m1-cA_3lgj-a1-m1-cB
23 3ic9-a2-m1-cD 469 41 0.1839 0.0341 0.3902 0.14 3ic9-a2-m1-cD_3ic9-a2-m1-cC
24 3lgj-a1-m1-cB 97 32 0.1264 0.1134 0.3438 0.14 3lgj-a1-m1-cA_3lgj-a1-m1-cB
25 3ic9-a2-m1-cC 471 41 0.1839 0.0340 0.3902 0.15 3ic9-a2-m1-cD_3ic9-a2-m1-cC
26 2dud-a2-m2-cB 92 60 0.1839 0.1739 0.2667 0.16 2dud-a2-m2-cB_2dud-a2-m1-cA, 2dud-a2-m2-cB_2dud-a2-m2-cA
27 4mz9-a1-m1-cD 114 32 0.1379 0.1053 0.3750 0.19 4mz9-a1-m1-cB_4mz9-a1-m1-cD, 4mz9-a1-m1-cC_4mz9-a1-m1-cD
28 4mz9-a1-m1-cC 114 32 0.1379 0.1053 0.3750 0.19 4mz9-a1-m1-cB_4mz9-a1-m1-cC, 4mz9-a1-m1-cC_4mz9-a1-m1-cD
29 4mz9-a1-m1-cB 114 32 0.1379 0.1053 0.3750 0.19 4mz9-a1-m1-cB_4mz9-a1-m1-cC, 4mz9-a1-m1-cB_4mz9-a1-m1-cD
30 1sru-a1-m1-cC 96 32 0.1379 0.1250 0.3750 0.27 1sru-a1-m1-cC_1sru-a1-m1-cA
31 1sru-a1-m1-cD 101 32 0.1379 0.1188 0.3750 0.28 1sru-a1-m1-cA_1sru-a1-m1-cD
32 1sru-a1-m1-cA 100 32 0.1379 0.1200 0.3750 0.30 1sru-a1-m1-cA_1sru-a1-m1-cD, 1sru-a1-m1-cC_1sru-a1-m1-cA
33 2dud-a2-m2-cA 95 32 0.1264 0.1158 0.3438 0.33 2dud-a2-m2-cB_2dud-a2-m2-cA
34 2dud-a2-m1-cA 95 32 0.1264 0.1158 0.3438 0.33 2dud-a2-m2-cB_2dud-a2-m1-cA
35 3tqy-a1-m1-cD 96 32 0.1379 0.1250 0.3750 0.51 3tqy-a1-m1-cD_3tqy-a1-m1-cC
36 2ztv-a1-m1-cD 253 47 0.1609 0.0553 0.2979 0.52 2ztv-a1-m1-cB_2ztv-a1-m1-cD
37 7f5y-a1-m2-cA 109 41 0.1494 0.1193 0.3171 0.58 7f5y-a1-m2-cA_7f5y-a1-m2-cB
38 1x1t-a1-m4-cA 236 34 0.1379 0.0508 0.3529 0.59 1x1t-a1-m1-cA_1x1t-a1-m4-cA
39 1x1t-a1-m1-cA 236 34 0.1379 0.0508 0.3529 0.59 1x1t-a1-m1-cA_1x1t-a1-m4-cA
40 3tqy-a1-m1-cC 106 32 0.1379 0.1132 0.3750 0.59 3tqy-a1-m1-cD_3tqy-a1-m1-cC
41 2ztv-a1-m1-cB 246 34 0.1379 0.0488 0.3529 0.61 2ztv-a1-m1-cB_2ztv-a1-m1-cD
42 1wkv-a1-m1-cB 383 51 0.2184 0.0496 0.3725 0.82 1wkv-a1-m1-cA_1wkv-a1-m1-cB
43 1wkv-a1-m1-cA 382 51 0.2184 0.0497 0.3725 0.83 1wkv-a1-m1-cA_1wkv-a1-m1-cB
44 3eiv-a2-m1-cB 111 43 0.1494 0.1171 0.3023 0.83 3eiv-a2-m1-cA_3eiv-a2-m1-cB
45 1o4s-a1-m1-cB 384 37 0.1494 0.0339 0.3514 3.5 1o4s-a1-m1-cA_1o4s-a1-m1-cB
46 1o4s-a1-m1-cA 375 37 0.1494 0.0347 0.3514 3.5 1o4s-a1-m1-cA_1o4s-a1-m1-cB
47 7lj1-a1-m1-cE 185 43 0.1034 0.0486 0.2093 7.2 7lj1-a1-m1-cB_7lj1-a1-m1-cE
48 7lj1-a1-m1-cB 185 43 0.1034 0.0486 0.2093 7.2 7lj1-a1-m1-cB_7lj1-a1-m1-cE
49 7lj1-a2-m1-cK 183 43 0.1034 0.0492 0.2093 7.2 7lj1-a2-m1-cL_7lj1-a2-m1-cK
50 7lj1-a2-m1-cL 181 43 0.1034 0.0497 0.2093 7.4 7lj1-a2-m1-cL_7lj1-a2-m1-cK
51 1x9i-a1-m1-cA 300 48 0.1839 0.0533 0.3333 7.6 1x9i-a1-m1-cA_1x9i-a1-m1-cB
52 1x9i-a1-m1-cB 301 48 0.1839 0.0532 0.3333 7.7 1x9i-a1-m1-cA_1x9i-a1-m1-cB
53 7nwr-a1-m2-cB 426 29 0.1264 0.0258 0.3793 8.2 7nwr-a1-m2-cB_7nwr-a1-m1-cB, 7nwr-a1-m2-cB_7nwr-a1-m2-cA
54 7nwr-a1-m2-cA 426 29 0.1264 0.0258 0.3793 8.2 7nwr-a1-m2-cB_7nwr-a1-m2-cA
55 7nwr-a1-m1-cB 426 29 0.1264 0.0258 0.3793 8.2 7nwr-a1-m2-cB_7nwr-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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