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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
DGRIFKFIEHLEFEKGLDAFSQSWIKALEDSEFLAILRLLFHHIVTSESAHEFAANGIDR
LYKVESQFGSGGDKELEWLIGRSLIQSK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ljl-a1-m1-cB 144 88 1.0000 0.6111 1.0000 5.19e-59 3ljl-a1-m1-cA_3ljl-a1-m1-cB
2 3ljl-a1-m1-cA 144 88 1.0000 0.6111 1.0000 5.19e-59 3ljl-a1-m1-cA_3ljl-a1-m1-cB
3 3b4s-a1-m3-cA 89 88 1.0000 0.9888 1.0000 1.25e-58 3b4s-a1-m2-cA_3b4s-a1-m3-cA, 3b4s-a1-m3-cB_3b4s-a1-m3-cA
4 3b4s-a1-m2-cA 89 88 1.0000 0.9888 1.0000 1.25e-58 3b4s-a1-m2-cA_3b4s-a1-m3-cA, 3b4s-a1-m3-cB_3b4s-a1-m2-cA
5 3b4s-a2-m1-cE 88 88 1.0000 1.0000 1.0000 1.58e-58 3b4s-a2-m1-cH_3b4s-a2-m1-cE
6 3b4s-a1-m3-cB 88 88 1.0000 1.0000 1.0000 1.58e-58 3b4s-a1-m2-cB_3b4s-a1-m3-cB, 3b4s-a1-m3-cB_3b4s-a1-m2-cA, 3b4s-a1-m3-cB_3b4s-a1-m3-cA
7 3b4s-a1-m2-cB 88 88 1.0000 1.0000 1.0000 1.58e-58 3b4s-a1-m2-cB_3b4s-a1-m3-cB
8 3b4s-a2-m1-cH 87 87 0.9886 1.0000 1.0000 1.20e-57 3b4s-a2-m1-cH_3b4s-a2-m1-cE
9 3cm1-a1-m1-cA 135 28 0.1023 0.0667 0.3214 2.4 3cm1-a1-m1-cC_3cm1-a1-m1-cA
10 7dt1-a1-m1-cB 845 41 0.1705 0.0178 0.3659 4.4 7dt1-a1-m1-cB_7dt1-a1-m1-cA
11 7dt1-a1-m1-cA 846 41 0.1705 0.0177 0.3659 4.4 7dt1-a1-m1-cB_7dt1-a1-m1-cA
12 2uxq-a1-m1-cB 401 55 0.1818 0.0399 0.2909 5.5 2uxq-a1-m1-cB_2uxq-a1-m1-cA
13 3eof-a1-m1-cA 238 25 0.1250 0.0462 0.4400 5.6 3eof-a1-m1-cB_3eof-a1-m1-cA
14 2uxq-a1-m1-cA 402 55 0.1818 0.0398 0.2909 5.6 2uxq-a1-m1-cB_2uxq-a1-m1-cA
15 3eof-a1-m1-cB 237 25 0.1250 0.0464 0.4400 5.8 3eof-a1-m1-cB_3eof-a1-m1-cA
16 7m4r-a1-m1-cA 360 41 0.1705 0.0417 0.3659 6.7 7m4r-a1-m1-cB_7m4r-a1-m1-cA
17 7m4r-a1-m1-cB 270 34 0.1591 0.0519 0.4118 6.8 7m4r-a1-m1-cB_7m4r-a1-m1-cA
18 7tgn-a2-m1-cC 568 44 0.1705 0.0264 0.3409 7.4 7tgn-a2-m1-cC_7tgn-a2-m1-cD
19 7tgn-a2-m1-cD 570 44 0.1705 0.0263 0.3409 7.8 7tgn-a2-m1-cC_7tgn-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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