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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
DHHYAMWDAAYVLGALSAADRREFEAHLAGCPECRGAVTELCGVPALLSQLDRDEVAAIS
ES

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3hug-a6-m1-cR 63 62 1.0000 0.9841 1.0000 1.72e-40 3hug-a6-m1-cT_3hug-a6-m1-cR
2 3hug-a6-m1-cT 62 62 1.0000 1.0000 1.0000 2.12e-40 3hug-a6-m1-cT_3hug-a6-m1-cR
3 1kpl-a2-m1-cC 430 47 0.3065 0.0442 0.4043 0.033 1kpl-a2-m1-cC_1kpl-a2-m1-cD
4 1kpl-a2-m1-cD 451 47 0.3065 0.0421 0.4043 0.033 1kpl-a2-m1-cC_1kpl-a2-m1-cD
5 3tzq-a2-m1-cH 261 33 0.2419 0.0575 0.4545 0.43 3tzq-a2-m1-cE_3tzq-a2-m1-cH, 3tzq-a2-m1-cF_3tzq-a2-m1-cH, 3tzq-a2-m1-cG_3tzq-a2-m1-cH
6 3tzq-a2-m1-cF 261 33 0.2419 0.0575 0.4545 0.43 3tzq-a2-m1-cF_3tzq-a2-m1-cH
7 6k4e-a1-m1-cA 245 54 0.2742 0.0694 0.3148 0.59 6k4e-a1-m1-cA_6k4e-a1-m1-cB
8 6k4e-a1-m1-cB 246 54 0.2742 0.0691 0.3148 0.59 6k4e-a1-m1-cA_6k4e-a1-m1-cB
9 3tzq-a2-m1-cG 260 32 0.2258 0.0538 0.4375 1.7 3tzq-a2-m1-cG_3tzq-a2-m1-cH
10 3tzq-a2-m1-cE 260 32 0.2258 0.0538 0.4375 1.7 3tzq-a2-m1-cE_3tzq-a2-m1-cH
11 1wcv-a1-m2-c1 243 28 0.1935 0.0494 0.4286 3.6 1wcv-a1-m1-c1_1wcv-a1-m2-c1
12 1wcv-a1-m1-c1 243 28 0.1935 0.0494 0.4286 3.6 1wcv-a1-m1-c1_1wcv-a1-m2-c1
13 2bek-a2-m1-cD 243 28 0.1935 0.0494 0.4286 3.6 2bek-a2-m1-cD_2bek-a2-m1-cC
14 2bek-a2-m1-cC 244 28 0.1935 0.0492 0.4286 3.7 2bek-a2-m1-cD_2bek-a2-m1-cC
15 1yxo-a1-m1-cB 322 40 0.2419 0.0466 0.3750 8.5 1yxo-a1-m1-cA_1yxo-a1-m1-cB
16 1yxo-a1-m1-cA 322 40 0.2419 0.0466 0.3750 8.5 1yxo-a1-m1-cA_1yxo-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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