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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
DHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARA
LSDLGKRMLKVSTHDIEAVTHQPARLLY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4wpy-a1-m2-cA 88 88 1.0000 1.0000 1.0000 6.24e-60 4wpy-a1-m1-cA_4wpy-a1-m2-cA
2 4wpy-a1-m1-cA 88 88 1.0000 1.0000 1.0000 6.24e-60 4wpy-a1-m1-cA_4wpy-a1-m2-cA
3 2fgg-a2-m2-cA 83 83 0.5227 0.5542 0.5542 1.15e-26 2fgg-a2-m1-cA_2fgg-a2-m2-cA
4 2fgg-a2-m1-cA 83 83 0.5227 0.5542 0.5542 1.15e-26 2fgg-a2-m1-cA_2fgg-a2-m2-cA
5 1izm-a1-m2-cA 168 60 0.1932 0.1012 0.2833 2.5 1izm-a1-m1-cA_1izm-a1-m2-cA
6 1izm-a1-m1-cA 168 60 0.1932 0.1012 0.2833 2.5 1izm-a1-m1-cA_1izm-a1-m2-cA
7 2v27-a1-m1-cB 272 74 0.2614 0.0846 0.3108 3.4 2v27-a1-m1-cA_2v27-a1-m1-cB
8 2v27-a1-m1-cA 264 74 0.2614 0.0871 0.3108 4.2 2v27-a1-m1-cA_2v27-a1-m1-cB
9 5giv-a2-m1-cF 501 77 0.2386 0.0419 0.2727 4.4 5giv-a2-m1-cB_5giv-a2-m1-cF
10 5giv-a2-m1-cB 501 77 0.2386 0.0419 0.2727 4.4 5giv-a2-m1-cB_5giv-a2-m1-cF
11 1hyh-a1-m1-cA 297 34 0.1364 0.0404 0.3529 4.4 1hyh-a1-m1-cA_1hyh-a1-m1-cD
12 1hyh-a1-m1-cD 297 34 0.1364 0.0404 0.3529 4.6 1hyh-a1-m1-cA_1hyh-a1-m1-cD, 1hyh-a1-m1-cB_1hyh-a1-m1-cD, 1hyh-a1-m1-cC_1hyh-a1-m1-cD
13 1hyh-a1-m1-cC 297 34 0.1364 0.0404 0.3529 4.6 1hyh-a1-m1-cC_1hyh-a1-m1-cD
14 1hyh-a1-m1-cB 294 34 0.1364 0.0408 0.3529 4.7 1hyh-a1-m1-cB_1hyh-a1-m1-cD
15 2cse-a1-m9-c1 1264 44 0.1477 0.0103 0.2955 9.2 2cse-a1-m7-c1_2cse-a1-m9-c1, 2cse-a1-m8-c1_2cse-a1-m9-c1
16 2cse-a1-m8-c1 1264 44 0.1477 0.0103 0.2955 9.2 2cse-a1-m8-c1_2cse-a1-m9-c1
17 2cse-a1-m7-c1 1264 44 0.1477 0.0103 0.2955 9.2 2cse-a1-m7-c1_2cse-a1-m9-c1
18 8h2i-a1-m5-cbG 504 29 0.0909 0.0159 0.2759 9.7 8h2i-a1-m4-cbG_8h2i-a1-m5-cbG
19 8h2i-a1-m4-cbG 504 29 0.0909 0.0159 0.2759 9.7 8h2i-a1-m4-cbG_8h2i-a1-m5-cbG

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Reference:
Jacob Schwartz et al.

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