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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=36)
DHYACVSSGGQCLYSACPIFTKIQGTCYRGKAKCCK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2nlb-a5-m3-cD 36 36 1.0000 1.0000 1.0000 8.25e-21 2nlb-a5-m1-cA_2nlb-a5-m3-cD
2 2nlb-a5-m1-cA 36 36 1.0000 1.0000 1.0000 8.25e-21 2nlb-a5-m1-cA_2nlb-a5-m3-cD
3 2nlq-a9-m3-cB 36 36 0.9444 0.9444 0.9444 2.11e-19 2nlq-a9-m1-cD_2nlq-a9-m3-cB
4 2nlq-a9-m1-cD 36 36 0.9444 0.9444 0.9444 2.11e-19 2nlq-a9-m1-cD_2nlq-a9-m3-cB
5 2nlq-a7-m5-cC 36 36 0.9444 0.9444 0.9444 2.11e-19 2nlq-a7-m2-cA_2nlq-a7-m5-cC
6 2nlq-a7-m2-cA 36 36 0.9444 0.9444 0.9444 2.11e-19 2nlq-a7-m2-cA_2nlq-a7-m5-cC
7 2nlf-a6-m5-cB 36 36 0.9444 0.9444 0.9444 3.70e-19 2nlf-a6-m1-cB_2nlf-a6-m5-cB
8 2nlf-a6-m1-cB 36 36 0.9444 0.9444 0.9444 3.70e-19 2nlf-a6-m1-cB_2nlf-a6-m5-cB
9 2bv8-a1-m1-cO 162 35 0.3889 0.0864 0.4000 0.12 2bv8-a1-m1-cC_2bv8-a1-m1-cO, 2bv8-a1-m1-cE_2bv8-a1-m1-cO
10 2bv8-a1-m1-cE 162 35 0.3889 0.0864 0.4000 0.12 2bv8-a1-m1-cE_2bv8-a1-m1-cO
11 2bv8-a1-m1-cC 162 35 0.3889 0.0864 0.4000 0.12 2bv8-a1-m1-cC_2bv8-a1-m1-cO
12 6y3d-a1-m1-cKKK 162 36 0.3611 0.0802 0.3611 0.55 6y3d-a1-m1-cEEE_6y3d-a1-m1-cKKK, 6y3d-a1-m1-cIII_6y3d-a1-m1-cKKK
13 6y3d-a1-m1-cIII 162 36 0.3611 0.0802 0.3611 0.55 6y3d-a1-m1-cIII_6y3d-a1-m1-cKKK
14 6y3d-a1-m1-cEEE 162 36 0.3611 0.0802 0.3611 0.55 6y3d-a1-m1-cEEE_6y3d-a1-m1-cKKK
15 2wk4-a1-m1-cA 499 15 0.2222 0.0160 0.5333 3.1 2wk4-a1-m1-cA_2wk4-a1-m1-cB
16 2wk4-a1-m1-cB 502 15 0.2222 0.0159 0.5333 3.1 2wk4-a1-m1-cA_2wk4-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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