Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=53)
DIIWDQLIVKRTLADLLIPINRQISDIQSTLSEVTTRVHEIERQLHEITPVLK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5toi-a1-m1-cC 70 53 1.0000 0.7571 1.0000 5.24e-32 5toi-a1-m1-cB_5toi-a1-m1-cC
2 5toi-a1-m1-cB 70 53 1.0000 0.7571 1.0000 5.24e-32 5toi-a1-m1-cB_5toi-a1-m1-cC
3 5toh-a1-m1-cB 70 53 1.0000 0.7571 1.0000 5.24e-32 5toh-a1-m1-cC_5toh-a1-m1-cB
4 5toh-a1-m1-cC 53 53 1.0000 1.0000 1.0000 1.90e-31 5toh-a1-m1-cA_5toh-a1-m1-cC, 5toh-a1-m1-cC_5toh-a1-m1-cB
5 5toh-a1-m1-cA 52 51 0.9623 0.9808 1.0000 4.53e-30 5toh-a1-m1-cA_5toh-a1-m1-cC
6 4r4m-a2-m2-cC 49 40 0.2264 0.2449 0.3000 0.20 4r4m-a2-m1-cC_4r4m-a2-m2-cC
7 4r4m-a2-m1-cC 49 40 0.2264 0.2449 0.3000 0.20 4r4m-a2-m1-cC_4r4m-a2-m2-cC
8 6xy1-a1-m1-cD 30 29 0.2264 0.4000 0.4138 0.62 6xy1-a1-m1-cB_6xy1-a1-m1-cD
9 6xy1-a1-m1-cD 30 26 0.1887 0.3333 0.3846 0.69 6xy1-a1-m1-cB_6xy1-a1-m1-cD
10 6xy1-a1-m1-cB 30 29 0.2264 0.4000 0.4138 0.62 6xy1-a1-m1-cB_6xy1-a1-m1-cD
11 6xy1-a1-m1-cB 30 26 0.1887 0.3333 0.3846 0.69 6xy1-a1-m1-cB_6xy1-a1-m1-cD
12 6igg-a1-m2-cA 170 23 0.2264 0.0706 0.5217 0.85 6igg-a1-m1-cA_6igg-a1-m2-cA
13 6igg-a1-m1-cA 170 23 0.2264 0.0706 0.5217 0.85 6igg-a1-m1-cA_6igg-a1-m2-cA
14 6gak-a1-m1-cB 131 34 0.2075 0.0840 0.3235 1.2 6gak-a1-m1-cA_6gak-a1-m1-cB
15 6gak-a1-m1-cA 130 34 0.2075 0.0846 0.3235 1.2 6gak-a1-m1-cA_6gak-a1-m1-cB
16 1wkp-a6-m1-cD 162 21 0.2075 0.0679 0.5238 1.5 1wkp-a6-m1-cD_1wkp-a6-m1-cA
17 1wkp-a6-m1-cA 163 21 0.2075 0.0675 0.5238 1.5 1wkp-a6-m1-cD_1wkp-a6-m1-cA
18 6gao-a1-m1-cB 225 30 0.1887 0.0444 0.3333 2.5 6gao-a1-m1-cC_6gao-a1-m1-cB
19 6gao-a1-m1-cC 221 30 0.1887 0.0452 0.3333 2.8 6gao-a1-m1-cC_6gao-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600