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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=53)
DKGLHLEQQLYSVEDICKLVDAIPLHELTSISCAKELLQQRELRRKLLADSVD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5lut-a3-m1-cD 53 53 1.0000 1.0000 1.0000 3.38e-32 5lut-a3-m1-cC_5lut-a3-m1-cD
2 5lut-a3-m1-cC 51 51 0.9623 1.0000 1.0000 9.92e-31 5lut-a3-m1-cC_5lut-a3-m1-cD
3 5lus-a5-m1-cJ 50 50 0.7358 0.7800 0.7800 6.77e-21 5lus-a5-m1-cI_5lus-a5-m1-cJ
4 5lus-a5-m1-cI 50 50 0.7358 0.7800 0.7800 6.77e-21 5lus-a5-m1-cI_5lus-a5-m1-cJ
5 5lup-a4-m1-cH 52 50 0.5094 0.5192 0.5400 6.35e-10 5lup-a4-m1-cG_5lup-a4-m1-cH
6 5lup-a4-m1-cG 52 50 0.4906 0.5000 0.5200 1.28e-09 5lup-a4-m1-cG_5lup-a4-m1-cH
7 4y8f-a1-m2-cA 251 41 0.3208 0.0677 0.4146 0.58 4y8f-a1-m1-cA_4y8f-a1-m2-cA
8 4y8f-a1-m1-cA 251 41 0.3208 0.0677 0.4146 0.58 4y8f-a1-m1-cA_4y8f-a1-m2-cA
9 7rpn-a1-m2-cA 252 45 0.2642 0.0556 0.3111 2.9 7rpn-a1-m1-cA_7rpn-a1-m2-cA
10 7rpn-a1-m1-cA 252 45 0.2642 0.0556 0.3111 2.9 7rpn-a1-m1-cA_7rpn-a1-m2-cA
11 6lon-a1-m1-cD 803 27 0.1698 0.0112 0.3333 5.7 6lon-a1-m1-cB_6lon-a1-m1-cD, 6lon-a1-m1-cD_6lon-a1-m1-cC
12 7m7k-a1-m2-cB 432 19 0.1509 0.0185 0.4211 6.8 7m7k-a1-m1-cB_7m7k-a1-m2-cB
13 7m7k-a1-m1-cB 432 19 0.1509 0.0185 0.4211 6.8 7m7k-a1-m1-cB_7m7k-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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