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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=63)
DKPLLQKIDANFNTVDSVLAKYRTKEGYESYEKLTDADRNAMKGPITALAEDLAQLRGVL
GLD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5tw9-a2-m1-cD 63 63 1.0000 1.0000 1.0000 4.87e-41 5tw9-a2-m1-cC_5tw9-a2-m1-cD
2 5tw9-a2-m1-cC 63 63 1.0000 1.0000 1.0000 4.87e-41 5tw9-a2-m1-cC_5tw9-a2-m1-cD
3 7wgu-a1-m2-cB 348 60 0.7778 0.1408 0.8167 2.95e-29 7wgu-a1-m2-cB_7wgu-a1-m1-cA
4 7wgu-a1-m1-cA 349 60 0.7778 0.1404 0.8167 2.97e-29 7wgu-a1-m2-cB_7wgu-a1-m1-cA
5 7q1g-a1-m2-cB 251 64 0.5556 0.1394 0.5469 9.61e-18 7q1g-a1-m1-cA_7q1g-a1-m2-cB
6 7q1g-a1-m1-cA 251 64 0.5556 0.1394 0.5469 9.61e-18 7q1g-a1-m1-cA_7q1g-a1-m2-cB
7 3wsc-a1-m1-cB 251 64 0.5079 0.1275 0.5000 6.52e-15 3wsc-a1-m1-cA_3wsc-a1-m1-cB
8 3wsc-a1-m1-cA 251 64 0.5079 0.1275 0.5000 6.52e-15 3wsc-a1-m1-cA_3wsc-a1-m1-cB
9 3lmn-a4-m3-cB 128 56 0.2540 0.1250 0.2857 0.83 3lmn-a4-m1-cB_3lmn-a4-m3-cB
10 3lmn-a4-m1-cB 128 56 0.2540 0.1250 0.2857 0.83 3lmn-a4-m1-cB_3lmn-a4-m3-cB
11 3lmn-a3-m3-cB 128 56 0.2540 0.1250 0.2857 0.83 3lmn-a3-m3-cB_3lmn-a3-m1-cA
12 3lmn-a2-m3-cB 128 56 0.2540 0.1250 0.2857 0.83 3lmn-a2-m3-cB_3lmn-a2-m3-cA
13 5ucd-a1-m1-cB 434 59 0.3175 0.0461 0.3390 0.93 5ucd-a1-m1-cA_5ucd-a1-m1-cB
14 5ucd-a1-m1-cA 434 59 0.3175 0.0461 0.3390 0.93 5ucd-a1-m1-cA_5ucd-a1-m1-cB
15 3ryw-a3-m2-cC 355 28 0.1746 0.0310 0.3929 1.4 3ryw-a3-m2-cC_3ryw-a3-m1-cA
16 5hn9-a2-m1-cC 334 28 0.1746 0.0329 0.3929 1.4 5hn9-a2-m1-cC_5hn9-a2-m1-cD
17 5hn9-a2-m1-cD 347 28 0.1746 0.0317 0.3929 1.4 5hn9-a2-m1-cC_5hn9-a2-m1-cD
18 3ryw-a3-m1-cA 358 28 0.1746 0.0307 0.3929 1.4 3ryw-a3-m2-cC_3ryw-a3-m1-cA
19 3sg8-a3-m1-cB 298 20 0.1746 0.0369 0.5500 1.5 3sg8-a3-m1-cA_3sg8-a3-m1-cB
20 3sg8-a3-m1-cA 298 20 0.1746 0.0369 0.5500 1.5 3sg8-a3-m1-cA_3sg8-a3-m1-cB
21 6dj9-a5-m6-cF 131 58 0.2381 0.1145 0.2586 2.3 6dj9-a5-m1-cB_6dj9-a5-m6-cF, 6dj9-a5-m6-cB_6dj9-a5-m6-cF
22 3lmn-a3-m1-cA 132 45 0.1905 0.0909 0.2667 2.6 3lmn-a3-m3-cB_3lmn-a3-m1-cA
23 3lmn-a2-m3-cA 132 45 0.1905 0.0909 0.2667 2.6 3lmn-a2-m3-cB_3lmn-a2-m3-cA
24 3lmn-a1-m4-cA 132 45 0.1905 0.0909 0.2667 2.6 3lmn-a1-m1-cA_3lmn-a1-m4-cA
25 3lmn-a1-m1-cA 132 45 0.1905 0.0909 0.2667 2.6 3lmn-a1-m1-cA_3lmn-a1-m4-cA
26 6dj9-a5-m6-cB 123 45 0.1905 0.0976 0.2667 2.8 6dj9-a5-m6-cB_6dj9-a5-m6-cF
27 6dj9-a5-m1-cB 123 45 0.1905 0.0976 0.2667 2.8 6dj9-a5-m1-cB_6dj9-a5-m6-cF
28 6hdz-a1-m1-cB 377 29 0.1905 0.0318 0.4138 5.0 6hdz-a1-m1-cB_6hdz-a1-m1-cA
29 3pv1-a2-m2-cB 214 45 0.1905 0.0561 0.2667 5.6 3pv1-a2-m1-cB_3pv1-a2-m2-cB, 3pv1-a2-m2-cB_3pv1-a2-m2-cA
30 3pv1-a2-m1-cB 214 45 0.1905 0.0561 0.2667 5.6 3pv1-a2-m1-cB_3pv1-a2-m2-cB
31 3pv1-a2-m2-cA 215 45 0.1905 0.0558 0.2667 5.6 3pv1-a2-m2-cB_3pv1-a2-m2-cA
32 6hdz-a1-m1-cA 421 29 0.1905 0.0285 0.4138 5.7 6hdz-a1-m1-cB_6hdz-a1-m1-cA
33 2ptr-a1-m2-cA 454 63 0.3016 0.0419 0.3016 5.8 2ptr-a1-m2-cA_2ptr-a1-m2-cB
34 6ncs-a1-m1-cB 285 29 0.1429 0.0316 0.3103 9.8 6ncs-a1-m1-cA_6ncs-a1-m1-cB
35 6ncs-a1-m1-cA 285 29 0.1429 0.0316 0.3103 9.8 6ncs-a1-m1-cA_6ncs-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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