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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
DKTTVYLPDELKAAVKRAARQRGVSEAQVIRESIRAAVGGAKPPPRGGYAGSEPIARRVD
ELLAGFGE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5x3t-a1-m1-cC 68 68 1.0000 1.0000 1.0000 9.30e-43 5x3t-a1-m1-cE_5x3t-a1-m1-cC
2 5x3t-a1-m1-cG 59 59 0.8676 1.0000 1.0000 1.26e-35 5x3t-a1-m1-cE_5x3t-a1-m1-cG
3 5x3t-a1-m1-cE 59 59 0.8676 1.0000 1.0000 1.26e-35 5x3t-a1-m1-cE_5x3t-a1-m1-cC, 5x3t-a1-m1-cE_5x3t-a1-m1-cG
4 5kr3-a1-m1-cB 458 68 0.3088 0.0459 0.3088 0.45 5kr3-a1-m1-cA_5kr3-a1-m1-cB
5 5kr3-a1-m1-cA 458 68 0.3088 0.0459 0.3088 0.45 5kr3-a1-m1-cA_5kr3-a1-m1-cB
6 4e3q-a3-m1-cD 439 35 0.1912 0.0296 0.3714 2.3 4e3q-a3-m1-cA_4e3q-a3-m1-cD
7 4e3q-a3-m1-cA 439 35 0.1912 0.0296 0.3714 2.3 4e3q-a3-m1-cA_4e3q-a3-m1-cD
8 4e3r-a3-m1-cB 451 35 0.1912 0.0288 0.3714 2.4 4e3r-a3-m1-cA_4e3r-a3-m1-cB
9 4e3r-a3-m1-cA 451 35 0.1912 0.0288 0.3714 2.4 4e3r-a3-m1-cA_4e3r-a3-m1-cB
10 4c65-a2-m3-cH 429 50 0.2794 0.0443 0.3800 3.9 4c65-a2-m3-cH_4c65-a2-m1-cE, 4c65-a2-m3-cH_4c65-a2-m3-cG
11 4c65-a2-m3-cG 431 50 0.2794 0.0441 0.3800 3.9 4c65-a2-m3-cH_4c65-a2-m3-cG
12 4c65-a1-m2-cC 433 50 0.2794 0.0439 0.3800 3.9 4c65-a1-m2-cC_4c65-a1-m2-cA
13 4c65-a2-m1-cE 435 50 0.2794 0.0437 0.3800 4.0 4c65-a2-m3-cH_4c65-a2-m1-cE
14 4c65-a1-m2-cA 436 50 0.2794 0.0436 0.3800 4.0 4c65-a1-m2-cC_4c65-a1-m2-cA
15 3vdg-a1-m2-cA 424 63 0.3382 0.0542 0.3651 4.4 3vdg-a1-m1-cA_3vdg-a1-m2-cA
16 3vdg-a1-m1-cA 424 63 0.3382 0.0542 0.3651 4.4 3vdg-a1-m1-cA_3vdg-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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