Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
DLAQPIASAKVIEVELNDDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGIDVVVE
SGKEKNITVKPKSAGTYELICRYHLLKGEGKVIVK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4hcf-a3-m2-cB 95 95 1.0000 1.0000 1.0000 1.97e-64 4hcf-a3-m1-cA_4hcf-a3-m2-cB
2 4hcg-a3-m1-cA 94 94 0.9895 1.0000 1.0000 1.57e-63 4hcg-a3-m3-cB_4hcg-a3-m1-cA
3 4hcg-a2-m1-cA 94 94 0.9895 1.0000 1.0000 1.57e-63 4hcg-a2-m2-cB_4hcg-a2-m1-cA
4 4hcg-a1-m1-cA 94 94 0.9895 1.0000 1.0000 1.57e-63 4hcg-a1-m1-cB_4hcg-a1-m1-cA
5 4hcg-a3-m3-cB 89 89 0.9368 1.0000 1.0000 2.01e-59 4hcg-a3-m3-cB_4hcg-a3-m1-cA
6 4hcg-a2-m2-cB 89 89 0.9368 1.0000 1.0000 2.01e-59 4hcg-a2-m2-cB_4hcg-a2-m1-cA
7 4hcg-a1-m1-cB 89 89 0.9368 1.0000 1.0000 2.01e-59 4hcg-a1-m1-cB_4hcg-a1-m1-cA
8 4hcf-a3-m1-cA 87 87 0.9158 1.0000 1.0000 6.48e-58 4hcf-a3-m1-cA_4hcf-a3-m2-cB
9 1qhq-a3-m5-cA 139 42 0.1263 0.0863 0.2857 0.74 1qhq-a3-m1-cA_1qhq-a3-m5-cA
10 1qhq-a3-m1-cA 139 42 0.1263 0.0863 0.2857 0.74 1qhq-a3-m1-cA_1qhq-a3-m5-cA
11 1qhq-a2-m4-cA 139 42 0.1263 0.0863 0.2857 0.74 1qhq-a2-m2-cA_1qhq-a2-m4-cA, 1qhq-a2-m3-cA_1qhq-a2-m4-cA
12 1qhq-a2-m3-cA 139 42 0.1263 0.0863 0.2857 0.74 1qhq-a2-m3-cA_1qhq-a2-m4-cA
13 1qhq-a2-m2-cA 139 42 0.1263 0.0863 0.2857 0.74 1qhq-a2-m2-cA_1qhq-a2-m4-cA
14 4cw9-a1-m1-cA 102 52 0.1474 0.1373 0.2692 8.6 4cw9-a1-m1-cA_4cw9-a1-m1-cB
15 6d8k-a1-m1-cC 569 79 0.2421 0.0404 0.2911 8.7 6d8k-a1-m1-cD_6d8k-a1-m1-cC
16 6d8k-a1-m1-cB 571 79 0.2421 0.0403 0.2911 8.9 6d8k-a1-m1-cD_6d8k-a1-m1-cB
17 4cw9-a1-m1-cB 104 52 0.1474 0.1346 0.2692 9.0 4cw9-a1-m1-cA_4cw9-a1-m1-cB
18 5x7r-a1-m1-cB 1247 62 0.2000 0.0152 0.3065 9.6 5x7r-a1-m1-cA_5x7r-a1-m1-cB
19 5x7r-a1-m1-cA 1247 62 0.2000 0.0152 0.3065 9.6 5x7r-a1-m1-cA_5x7r-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600