Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
DLATGAKVFSANCAACHAGGINLVNAEKTLKKEALEKFGMNSIVAITTQVTNGKAGMPAF
KGRLTDDQIAAVAAYVLDQAEKGW

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2v08-a1-m3-cB 84 84 1.0000 1.0000 1.0000 1.80e-57 2v08-a1-m1-cA_2v08-a1-m3-cB, 2v08-a1-m2-cB_2v08-a1-m3-cB, 2v08-a1-m3-cA_2v08-a1-m3-cB
2 2v08-a1-m3-cA 84 84 1.0000 1.0000 1.0000 1.80e-57 2v08-a1-m3-cA_2v08-a1-m3-cB
3 2v08-a1-m2-cB 84 84 1.0000 1.0000 1.0000 1.80e-57 2v08-a1-m2-cB_2v08-a1-m3-cB
4 2v08-a1-m1-cA 84 84 1.0000 1.0000 1.0000 1.80e-57 2v08-a1-m1-cA_2v08-a1-m3-cB
5 2zbo-a7-m1-cK 86 84 0.6071 0.5930 0.6071 4.41e-33 2zbo-a7-m1-cA_2zbo-a7-m1-cK, 2zbo-a7-m1-cC_2zbo-a7-m1-cK, 2zbo-a7-m1-cI_2zbo-a7-m1-cK
6 2zbo-a7-m1-cI 86 84 0.6071 0.5930 0.6071 4.41e-33 2zbo-a7-m1-cI_2zbo-a7-m1-cK
7 2zbo-a7-m1-cE 86 84 0.6071 0.5930 0.6071 4.41e-33 2zbo-a7-m1-cC_2zbo-a7-m1-cE
8 2zbo-a7-m1-cC 86 84 0.6071 0.5930 0.6071 4.41e-33 2zbo-a7-m1-cC_2zbo-a7-m1-cE, 2zbo-a7-m1-cC_2zbo-a7-m1-cK
9 2zbo-a7-m1-cA 86 84 0.6071 0.5930 0.6071 4.41e-33 2zbo-a7-m1-cA_2zbo-a7-m1-cK
10 1c6o-a1-m1-cB 89 82 0.5952 0.5618 0.6098 2.70e-27 1c6o-a1-m1-cA_1c6o-a1-m1-cB
11 1c6o-a1-m1-cA 89 82 0.5952 0.5618 0.6098 2.70e-27 1c6o-a1-m1-cA_1c6o-a1-m1-cB
12 4kmg-a2-m2-cA 88 80 0.3095 0.2955 0.3250 1.50e-10 4kmg-a2-m1-cA_4kmg-a2-m2-cA
13 4kmg-a2-m1-cA 88 80 0.3095 0.2955 0.3250 1.50e-10 4kmg-a2-m1-cA_4kmg-a2-m2-cA
14 2dge-a2-m2-cD 100 96 0.3690 0.3100 0.3229 2.33e-10 2dge-a2-m2-cD_2dge-a2-m2-cB
15 2dge-a1-m1-cD 100 96 0.3690 0.3100 0.3229 2.33e-10 2dge-a1-m1-cD_2dge-a1-m1-cA
16 2dge-a2-m2-cB 102 96 0.3690 0.3039 0.3229 2.47e-10 2dge-a2-m1-cA_2dge-a2-m2-cB, 2dge-a2-m2-cD_2dge-a2-m2-cB
17 2dge-a2-m1-cA 102 96 0.3690 0.3039 0.3229 2.47e-10 2dge-a2-m1-cA_2dge-a2-m2-cB
18 2dge-a1-m1-cA 102 96 0.3690 0.3039 0.3229 2.47e-10 2dge-a1-m1-cD_2dge-a1-m1-cA
19 4lji-a1-m1-cB 131 97 0.3333 0.2137 0.2887 4.81e-05 4lji-a1-m1-cB_4lji-a1-m1-cA
20 4lji-a1-m1-cA 133 97 0.3333 0.2105 0.2887 4.98e-05 4lji-a1-m1-cB_4lji-a1-m1-cA
21 1f1c-a1-m1-cB 129 100 0.3095 0.2016 0.2600 0.001 1f1c-a1-m1-cA_1f1c-a1-m1-cB
22 1f1c-a1-m1-cA 129 100 0.3095 0.2016 0.2600 0.001 1f1c-a1-m1-cA_1f1c-a1-m1-cB
23 4pwa-a2-m3-cD 87 85 0.3690 0.3563 0.3647 0.002 4pwa-a2-m3-cB_4pwa-a2-m3-cD
24 4pwa-a2-m3-cB 86 85 0.3690 0.3605 0.3647 0.002 4pwa-a2-m3-cB_4pwa-a2-m3-cD
25 2zoo-a1-m3-cA 438 84 0.3333 0.0639 0.3333 0.019 2zoo-a1-m2-cA_2zoo-a1-m3-cA
26 2zoo-a1-m2-cA 438 84 0.3333 0.0639 0.3333 0.019 2zoo-a1-m2-cA_2zoo-a1-m3-cA
27 7wsq-a1-m1-cF 418 88 0.2976 0.0598 0.2841 0.83 7wsq-a1-m1-cC_7wsq-a1-m1-cF
28 7wsq-a1-m1-cC 418 88 0.2976 0.0598 0.2841 0.83 7wsq-a1-m1-cC_7wsq-a1-m1-cF
29 4bai-a1-m4-cA 367 43 0.1905 0.0436 0.3721 1.1 4bai-a1-m3-cA_4bai-a1-m4-cA
30 4bai-a1-m3-cA 367 43 0.1905 0.0436 0.3721 1.1 4bai-a1-m3-cA_4bai-a1-m4-cA
31 6qpx-a1-m4-cA 454 84 0.2738 0.0507 0.2738 1.1 6qpx-a1-m2-cA_6qpx-a1-m4-cA
32 6qpx-a1-m2-cA 454 84 0.2738 0.0507 0.2738 1.1 6qpx-a1-m2-cA_6qpx-a1-m4-cA
33 2y74-a1-m1-cA 694 34 0.1667 0.0202 0.4118 1.2 2y74-a1-m1-cA_2y74-a1-m1-cB
34 2y74-a1-m1-cB 698 34 0.1667 0.0201 0.4118 1.2 2y74-a1-m1-cA_2y74-a1-m1-cB
35 1ici-a1-m1-cA 256 64 0.2381 0.0781 0.3125 2.7 1ici-a1-m1-cB_1ici-a1-m1-cA
36 1m2n-a1-m1-cB 249 64 0.2381 0.0803 0.3125 3.5 1m2n-a1-m1-cA_1m2n-a1-m1-cB
37 1m2n-a1-m1-cA 249 64 0.2381 0.0803 0.3125 3.5 1m2n-a1-m1-cA_1m2n-a1-m1-cB
38 1ici-a3-m3-cB 244 64 0.2381 0.0820 0.3125 3.9 1ici-a3-m1-cB_1ici-a3-m3-cB
39 1ici-a3-m1-cB 244 64 0.2381 0.0820 0.3125 3.9 1ici-a3-m1-cB_1ici-a3-m3-cB
40 1ici-a1-m1-cB 244 64 0.2381 0.0820 0.3125 3.9 1ici-a1-m1-cB_1ici-a1-m1-cA
41 4rsz-a7-m3-cF 104 18 0.0952 0.0769 0.4444 4.2 4rsz-a7-m3-cD_4rsz-a7-m3-cF
42 4rsz-a7-m3-cD 104 18 0.0952 0.0769 0.4444 4.2 4rsz-a7-m1-cA_4rsz-a7-m3-cD, 4rsz-a7-m3-cD_4rsz-a7-m3-cF
43 4rsz-a7-m1-cA 104 18 0.0952 0.0769 0.4444 4.2 4rsz-a7-m1-cA_4rsz-a7-m3-cD
44 3wc8-a1-m2-cA 104 18 0.0952 0.0769 0.4444 4.2 3wc8-a1-m1-cA_3wc8-a1-m2-cA
45 3wc8-a1-m1-cA 104 18 0.0952 0.0769 0.4444 4.2 3wc8-a1-m1-cA_3wc8-a1-m2-cA
46 3nbt-a1-m1-cF 104 18 0.0952 0.0769 0.4444 4.2 3nbt-a1-m1-cE_3nbt-a1-m1-cF
47 3nbt-a1-m1-cE 104 18 0.0952 0.0769 0.4444 4.2 3nbt-a1-m1-cE_3nbt-a1-m1-cF
48 5h83-a1-m1-cB 350 31 0.1310 0.0314 0.3548 4.2 5h83-a1-m1-cB_5h83-a1-m1-cA
49 5h83-a1-m1-cA 354 31 0.1310 0.0311 0.3548 4.2 5h83-a1-m1-cB_5h83-a1-m1-cA
50 4bei-a1-m1-cH 234 61 0.2024 0.0726 0.2787 8.2 4bei-a1-m1-cG_4bei-a1-m1-cH
51 4bei-a1-m1-cG 233 61 0.2024 0.0730 0.2787 8.9 4bei-a1-m1-cG_4bei-a1-m1-cH

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600