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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=78)
DLCQECEDIVHLLTKMTKEDAFQEAIRKFLEQECDILPLKLLVPRCRQVLDVYLPLVIDY
FQSQINPKAICNHVGLCP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6vyn-a3-m1-cF 79 78 1.0000 0.9873 1.0000 1.34e-52 6vyn-a3-m1-cD_6vyn-a3-m1-cF
2 6vyn-a3-m1-cD 78 78 1.0000 1.0000 1.0000 1.50e-52 6vyn-a3-m1-cD_6vyn-a3-m1-cF
3 7mbk-a1-m1-cB 82 78 0.9231 0.8780 0.9231 1.60e-49 7mbk-a1-m1-cA_7mbk-a1-m1-cB
4 7mbk-a1-m1-cA 77 77 0.9103 0.9221 0.9221 1.56e-48 7mbk-a1-m1-cA_7mbk-a1-m1-cB
5 7p4t-a1-m1-cD 80 76 0.3077 0.3000 0.3158 8.01e-11 7p4t-a1-m1-cA_7p4t-a1-m1-cD, 7p4t-a1-m1-cC_7p4t-a1-m1-cD
6 7p4t-a1-m1-cC 80 76 0.3077 0.3000 0.3158 8.01e-11 7p4t-a1-m1-cB_7p4t-a1-m1-cC, 7p4t-a1-m1-cC_7p4t-a1-m1-cD
7 7p4t-a1-m1-cB 80 76 0.3077 0.3000 0.3158 8.01e-11 7p4t-a1-m1-cB_7p4t-a1-m1-cC
8 7p4t-a1-m1-cA 80 76 0.3077 0.3000 0.3158 8.01e-11 7p4t-a1-m1-cA_7p4t-a1-m1-cD
9 5nxb-a1-m1-cD 80 76 0.3077 0.3000 0.3158 8.01e-11 5nxb-a1-m1-cC_5nxb-a1-m1-cD
10 5nxb-a1-m1-cC 80 76 0.3077 0.3000 0.3158 8.01e-11 5nxb-a1-m1-cC_5nxb-a1-m1-cD
11 2dob-a2-m2-cA 79 75 0.3205 0.3165 0.3333 1.57e-10 2dob-a2-m1-cA_2dob-a2-m2-cA
12 2dob-a2-m1-cA 79 75 0.3205 0.3165 0.3333 1.57e-10 2dob-a2-m1-cA_2dob-a2-m2-cA
13 2qyp-a1-m1-cA 78 75 0.2564 0.2564 0.2667 2.27e-05 2qyp-a1-m1-cA_2qyp-a1-m1-cB
14 2qyp-a1-m1-cB 81 75 0.2564 0.2469 0.2667 2.38e-05 2qyp-a1-m1-cA_2qyp-a1-m1-cB
15 2rb3-a2-m1-cC 79 78 0.2564 0.2532 0.2564 7.24e-05 2rb3-a2-m1-cB_2rb3-a2-m1-cC
16 2rb3-a2-m1-cB 79 78 0.2564 0.2532 0.2564 7.24e-05 2rb3-a2-m1-cB_2rb3-a2-m1-cC
17 5u85-a1-m1-cB 77 78 0.2564 0.2597 0.2564 9.52e-05 5u85-a1-m1-cB_5u85-a1-m1-cA
18 5u85-a1-m1-cA 78 78 0.2564 0.2564 0.2564 9.61e-05 5u85-a1-m1-cB_5u85-a1-m1-cA
19 3rfi-a2-m2-cA 80 33 0.1154 0.1125 0.2727 0.23 3rfi-a2-m1-cA_3rfi-a2-m2-cA
20 3rfi-a2-m2-cA 80 37 0.1282 0.1250 0.2703 7.5 3rfi-a2-m1-cA_3rfi-a2-m2-cA
21 3rfi-a2-m1-cA 80 33 0.1154 0.1125 0.2727 0.23 3rfi-a2-m1-cA_3rfi-a2-m2-cA
22 3rfi-a2-m1-cA 80 37 0.1282 0.1250 0.2703 7.5 3rfi-a2-m1-cA_3rfi-a2-m2-cA
23 6jws-a1-m1-cA 551 53 0.2179 0.0309 0.3208 0.24 6jws-a1-m1-cA_6jws-a1-m1-cB
24 6jws-a1-m1-cB 589 53 0.2179 0.0289 0.3208 1.7 6jws-a1-m1-cA_6jws-a1-m1-cB
25 5z79-a2-m1-cC 599 53 0.2308 0.0301 0.3396 2.3 5z79-a2-m1-cD_5z79-a2-m1-cC
26 5z79-a2-m1-cD 577 53 0.2308 0.0312 0.3396 2.4 5z79-a2-m1-cD_5z79-a2-m1-cC
27 5htk-a1-m1-cA 424 44 0.1795 0.0330 0.3182 3.6 5htk-a1-m1-cB_5htk-a1-m1-cA
28 5htk-a1-m1-cB 419 44 0.1795 0.0334 0.3182 3.7 5htk-a1-m1-cB_5htk-a1-m1-cA
29 3awd-a1-m1-cD 257 39 0.1795 0.0545 0.3590 6.0 3awd-a1-m1-cA_3awd-a1-m1-cD, 3awd-a1-m1-cB_3awd-a1-m1-cD, 3awd-a1-m1-cC_3awd-a1-m1-cD
30 3awd-a1-m1-cC 257 39 0.1795 0.0545 0.3590 6.0 3awd-a1-m1-cC_3awd-a1-m1-cD
31 3awd-a1-m1-cB 257 39 0.1795 0.0545 0.3590 6.0 3awd-a1-m1-cB_3awd-a1-m1-cD
32 3awd-a1-m1-cA 257 39 0.1795 0.0545 0.3590 6.0 3awd-a1-m1-cA_3awd-a1-m1-cD
33 5lp8-a1-m1-cA 432 48 0.1667 0.0301 0.2708 6.2 5lp8-a1-m1-cB_5lp8-a1-m1-cA
34 5lp8-a1-m1-cB 416 48 0.1667 0.0312 0.2708 6.3 5lp8-a1-m1-cB_5lp8-a1-m1-cA
35 4xm5-a1-m2-cA 267 55 0.2051 0.0599 0.2909 8.4 4xm5-a1-m1-cA_4xm5-a1-m2-cA
36 4xm5-a1-m1-cA 267 55 0.2051 0.0599 0.2909 8.4 4xm5-a1-m1-cA_4xm5-a1-m2-cA
37 6hjw-a1-m1-cB 245 40 0.1923 0.0612 0.3750 9.8 6hjw-a1-m1-cA_6hjw-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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