Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
DLELKELQSKKEYFEKDSQRGIYATFTWLVEEVGELAEALLSNNLDSIQEELADVIAWTV
SIANLEGIDIEEALKKKYKL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1vmg-a2-m4-cA 80 80 1.0000 1.0000 1.0000 2.29e-51 1vmg-a2-m1-cA_1vmg-a2-m4-cA, 1vmg-a2-m2-cA_1vmg-a2-m4-cA, 1vmg-a2-m3-cA_1vmg-a2-m4-cA
2 1vmg-a2-m3-cA 80 80 1.0000 1.0000 1.0000 2.29e-51 1vmg-a2-m3-cA_1vmg-a2-m4-cA
3 1vmg-a2-m2-cA 80 80 1.0000 1.0000 1.0000 2.29e-51 1vmg-a2-m2-cA_1vmg-a2-m4-cA
4 1vmg-a2-m1-cA 80 80 1.0000 1.0000 1.0000 2.29e-51 1vmg-a2-m1-cA_1vmg-a2-m4-cA
5 2q5z-a1-m2-cA 93 82 0.3375 0.2903 0.3293 2.61e-06 2q5z-a1-m2-cA_2q5z-a1-m2-cB
6 2q5z-a1-m2-cB 94 81 0.3375 0.2872 0.3333 3.26e-06 2q5z-a1-m2-cA_2q5z-a1-m2-cB
7 2q9l-a1-m1-cB 90 81 0.3375 0.3000 0.3333 3.55e-06 2q9l-a1-m1-cD_2q9l-a1-m1-cB
8 2q9l-a1-m1-cD 78 57 0.2625 0.2692 0.3684 4.23e-05 2q9l-a1-m1-cD_2q9l-a1-m1-cB
9 5ie9-a1-m1-cD 92 73 0.3000 0.2609 0.3288 6.15e-04 5ie9-a1-m1-cD_5ie9-a1-m1-cA, 5ie9-a1-m1-cD_5ie9-a1-m1-cB, 5ie9-a1-m1-cD_5ie9-a1-m1-cC
10 7ody-a1-m1-cB 94 69 0.2625 0.2234 0.3043 0.003 7ody-a1-m1-cD_7ody-a1-m1-cB
11 7ody-a1-m1-cA 99 69 0.2625 0.2121 0.3043 0.003 7ody-a1-m1-cD_7ody-a1-m1-cA
12 5ie9-a1-m1-cB 94 76 0.3125 0.2660 0.3289 0.009 5ie9-a1-m1-cD_5ie9-a1-m1-cB
13 5ie9-a1-m1-cA 94 76 0.3125 0.2660 0.3289 0.009 5ie9-a1-m1-cD_5ie9-a1-m1-cA
14 7ody-a1-m1-cD 92 69 0.2750 0.2391 0.3188 0.010 7ody-a1-m1-cD_7ody-a1-m1-cA, 7ody-a1-m1-cD_7ody-a1-m1-cB, 7ody-a1-m1-cD_7ody-a1-m1-cC
15 5ie9-a1-m1-cC 95 77 0.3125 0.2632 0.3247 0.013 5ie9-a1-m1-cD_5ie9-a1-m1-cC
16 7ody-a1-m1-cC 100 69 0.2500 0.2000 0.2899 0.013 7ody-a1-m1-cD_7ody-a1-m1-cC
17 2gta-a1-m1-cC 81 77 0.2875 0.2840 0.2987 0.037 2gta-a1-m1-cC_2gta-a1-m1-cA, 2gta-a1-m1-cC_2gta-a1-m1-cB
18 2oig-a1-m1-cC 90 60 0.2625 0.2333 0.3500 0.042 2oig-a1-m1-cC_2oig-a1-m1-cD
19 2oig-a1-m1-cD 104 62 0.2625 0.2019 0.3387 0.11 2oig-a1-m1-cC_2oig-a1-m1-cD
20 2yxh-a1-m1-cB 113 51 0.2250 0.1593 0.3529 0.39 2yxh-a1-m1-cA_2yxh-a1-m1-cB
21 2yxh-a1-m1-cA 112 51 0.2250 0.1607 0.3529 0.41 2yxh-a1-m1-cA_2yxh-a1-m1-cB
22 2qzu-a1-m2-cA 450 37 0.1875 0.0333 0.4054 0.47 2qzu-a1-m1-cA_2qzu-a1-m2-cA
23 2qzu-a1-m1-cA 450 37 0.1875 0.0333 0.4054 0.47 2qzu-a1-m1-cA_2qzu-a1-m2-cA
24 7mu5-a2-m1-cB 105 58 0.2500 0.1905 0.3448 0.55 7mu5-a2-m1-cH_7mu5-a2-m1-cB
25 7mu5-a2-m1-cH 104 58 0.2500 0.1923 0.3448 0.59 7mu5-a2-m1-cH_7mu5-a2-m1-cB, 7mu5-a2-m1-cH_7mu5-a2-m1-cF
26 7mu5-a2-m1-cF 106 59 0.2500 0.1887 0.3390 0.85 7mu5-a2-m1-cH_7mu5-a2-m1-cF
27 2gta-a1-m1-cA 92 86 0.2875 0.2500 0.2674 0.87 2gta-a1-m1-cC_2gta-a1-m1-cA
28 1aa1-a1-m2-cL 437 20 0.1250 0.0229 0.5000 0.89 1aa1-a1-m2-cB_1aa1-a1-m2-cL
29 1aa1-a1-m2-cB 437 20 0.1250 0.0229 0.5000 0.89 1aa1-a1-m2-cB_1aa1-a1-m2-cL
30 1rco-a1-m1-cV 467 20 0.1250 0.0214 0.5000 0.89 1rco-a1-m1-cL_1rco-a1-m1-cV, 1rco-a1-m1-cR_1rco-a1-m1-cV
31 1rco-a1-m1-cR 467 20 0.1250 0.0214 0.5000 0.89 1rco-a1-m1-cR_1rco-a1-m1-cV
32 1rco-a1-m1-cL 467 20 0.1250 0.0214 0.5000 0.89 1rco-a1-m1-cL_1rco-a1-m1-cV
33 7mu5-a1-m1-cG 104 59 0.2500 0.1923 0.3390 0.93 7mu5-a1-m1-cG_7mu5-a1-m1-cA
34 5myf-a1-m1-cD 158 24 0.1500 0.0759 0.5000 1.3 5myf-a1-m1-cA_5myf-a1-m1-cD
35 5myf-a1-m1-cA 155 24 0.1500 0.0774 0.5000 1.4 5myf-a1-m1-cA_5myf-a1-m1-cD
36 5mil-a1-m1-cA 157 27 0.1500 0.0764 0.4444 1.5 5mil-a1-m1-cB_5mil-a1-m1-cA
37 5mil-a1-m1-cB 156 27 0.1500 0.0769 0.4444 1.5 5mil-a1-m1-cB_5mil-a1-m1-cA
38 1gk8-a1-m2-cE 460 19 0.1250 0.0217 0.5263 1.8 1gk8-a1-m2-cE_1gk8-a1-m2-cG
39 1gk8-a1-m2-cG 462 19 0.1250 0.0216 0.5263 1.8 1gk8-a1-m2-cE_1gk8-a1-m2-cG, 1gk8-a1-m2-cG_1gk8-a1-m1-cA, 1gk8-a1-m2-cG_1gk8-a1-m1-cC
40 1gk8-a1-m1-cC 464 19 0.1250 0.0216 0.5263 1.8 1gk8-a1-m2-cG_1gk8-a1-m1-cC
41 1gk8-a1-m1-cA 464 19 0.1250 0.0216 0.5263 1.8 1gk8-a1-m2-cG_1gk8-a1-m1-cA
42 2gta-a1-m1-cB 90 82 0.2750 0.2444 0.2683 2.5 2gta-a1-m1-cC_2gta-a1-m1-cB
43 7mu5-a1-m1-cA 110 62 0.2500 0.1818 0.3226 2.7 7mu5-a1-m1-cG_7mu5-a1-m1-cA
44 7lwz-a1-m1-cF 373 59 0.2500 0.0536 0.3390 2.7 7lwz-a1-m1-cF_7lwz-a1-m1-cB, 7lwz-a1-m1-cF_7lwz-a1-m1-cE
45 3b4u-a1-m1-cA 287 42 0.1500 0.0418 0.2857 3.9 3b4u-a1-m1-cA_3b4u-a1-m1-cB
46 3b4u-a1-m1-cB 288 42 0.1500 0.0417 0.2857 3.9 3b4u-a1-m1-cA_3b4u-a1-m1-cB
47 7xsd-a1-m1-cH 394 19 0.1125 0.0228 0.4737 4.9 7xsd-a1-m1-cE_7xsd-a1-m1-cH, 7xsd-a1-m1-cG_7xsd-a1-m1-cH
48 7xsd-a1-m1-cG 394 19 0.1125 0.0228 0.4737 4.9 7xsd-a1-m1-cG_7xsd-a1-m1-cH
49 7xsd-a1-m1-cE 394 19 0.1125 0.0228 0.4737 4.9 7xsd-a1-m1-cE_7xsd-a1-m1-cH
50 1y6x-a3-m5-cA 86 56 0.1875 0.1744 0.2679 5.3 1y6x-a3-m1-cA_1y6x-a3-m5-cA
51 1y6x-a3-m1-cA 86 56 0.1875 0.1744 0.2679 5.3 1y6x-a3-m1-cA_1y6x-a3-m5-cA
52 1y6x-a2-m4-cA 86 56 0.1875 0.1744 0.2679 5.3 1y6x-a2-m1-cA_1y6x-a2-m4-cA
53 1y6x-a2-m3-cA 86 56 0.1875 0.1744 0.2679 5.3 1y6x-a2-m1-cA_1y6x-a2-m3-cA
54 1y6x-a2-m1-cA 86 56 0.1875 0.1744 0.2679 5.3 1y6x-a2-m1-cA_1y6x-a2-m3-cA, 1y6x-a2-m1-cA_1y6x-a2-m4-cA
55 1y6x-a1-m2-cA 86 56 0.1875 0.1744 0.2679 5.3 1y6x-a1-m1-cA_1y6x-a1-m2-cA
56 1y6x-a1-m1-cA 86 56 0.1875 0.1744 0.2679 5.3 1y6x-a1-m1-cA_1y6x-a1-m2-cA
57 5xfr-a1-m1-cB 298 45 0.1750 0.0470 0.3111 5.9 5xfr-a1-m1-cB_5xfr-a1-m1-cA
58 5xfr-a1-m1-cA 309 45 0.1750 0.0453 0.3111 6.2 5xfr-a1-m1-cB_5xfr-a1-m1-cA
59 5myi-a1-m2-cD 165 24 0.1375 0.0667 0.4583 8.5 5myi-a1-m1-cD_5myi-a1-m2-cD
60 5myi-a1-m1-cD 165 24 0.1375 0.0667 0.4583 8.5 5myi-a1-m1-cD_5myi-a1-m2-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600