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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=59)
DLIMTILPGMTVKVTNPNDTYYQFQGIVQRITDGKVAVLFEGGNWDKLVTFQASELEPV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6a7k-a3-m1-cA 62 59 1.0000 0.9516 1.0000 3.69e-39 6a7k-a3-m1-cB_6a7k-a3-m1-cA
2 6a7k-a3-m1-cB 59 59 1.0000 1.0000 1.0000 5.60e-39 6a7k-a3-m1-cB_6a7k-a3-m1-cA
3 3zyv-a2-m1-cC 1244 59 0.3390 0.0161 0.3390 1.3 3zyv-a2-m1-cC_3zyv-a2-m1-cD
4 3zyv-a2-m1-cD 1257 59 0.3390 0.0159 0.3390 1.3 3zyv-a2-m1-cC_3zyv-a2-m1-cD
5 2exh-a2-m2-cC 533 45 0.2373 0.0263 0.3111 1.6 2exh-a2-m2-cB_2exh-a2-m2-cC
6 2exh-a2-m2-cB 533 45 0.2373 0.0263 0.3111 1.6 2exh-a2-m1-cA_2exh-a2-m2-cB, 2exh-a2-m2-cB_2exh-a2-m2-cC
7 2exh-a2-m1-cA 533 45 0.2373 0.0263 0.3111 1.6 2exh-a2-m1-cA_2exh-a2-m2-cB
8 2exh-a1-m1-cD 533 45 0.2373 0.0263 0.3111 1.6 2exh-a1-m1-cB_2exh-a1-m1-cD
9 2exh-a1-m1-cB 533 45 0.2373 0.0263 0.3111 1.6 2exh-a1-m1-cB_2exh-a1-m1-cD
10 5ufl-a1-m1-cB 511 45 0.2373 0.0274 0.3111 3.5 5ufl-a1-m1-cB_5ufl-a1-m1-cA
11 5xev-a1-m2-cA 409 28 0.1864 0.0269 0.3929 5.2 5xev-a1-m1-cA_5xev-a1-m2-cA
12 5xev-a1-m1-cA 409 28 0.1864 0.0269 0.3929 5.2 5xev-a1-m1-cA_5xev-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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