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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=60)
DLPEERHKVDNKNFYFDIGQNNRGVYRISEVKNNFRTSITIPEKCWIRFRDIFNDYCEKK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5fgo-a3-m1-cE 61 60 1.0000 0.9836 1.0000 6.92e-40 5fgo-a3-m1-cF_5fgo-a3-m1-cE
2 5fgo-a3-m1-cF 60 60 1.0000 1.0000 1.0000 8.21e-40 5fgo-a3-m1-cF_5fgo-a3-m1-cE
3 8duj-a1-m1-cA 3823 49 0.2167 0.0034 0.2653 5.0 8duj-a1-m1-cA_8duj-a1-m1-cG
4 8dve-a1-m1-cJ 3943 49 0.2167 0.0033 0.2653 5.1 8dve-a1-m1-cJ_8dve-a1-m1-cG
5 7umz-a1-m1-cD 3927 49 0.2167 0.0033 0.2653 5.1 7umz-a1-m1-cC_7umz-a1-m1-cD
6 7umz-a1-m1-cC 3927 49 0.2167 0.0033 0.2653 5.1 7umz-a1-m1-cC_7umz-a1-m1-cD
7 8dve-a1-m1-cG 3944 49 0.2167 0.0033 0.2653 5.1 8dve-a1-m1-cJ_8dve-a1-m1-cG
8 7k0t-a1-m1-cD 4105 49 0.2167 0.0032 0.2653 5.1 7k0t-a1-m1-cC_7k0t-a1-m1-cD
9 7k0t-a1-m1-cC 4105 49 0.2167 0.0032 0.2653 5.1 7k0t-a1-m1-cC_7k0t-a1-m1-cD
10 7tdj-a1-m1-cD 4133 49 0.2167 0.0031 0.2653 5.1 7tdj-a1-m1-cC_7tdj-a1-m1-cD
11 7tdj-a1-m1-cC 4133 49 0.2167 0.0031 0.2653 5.1 7tdj-a1-m1-cC_7tdj-a1-m1-cD
12 6foo-a1-m1-cD 4168 49 0.2167 0.0031 0.2653 5.1 6foo-a1-m1-cC_6foo-a1-m1-cD
13 6foo-a1-m1-cC 4168 49 0.2167 0.0031 0.2653 5.1 6foo-a1-m1-cC_6foo-a1-m1-cD
14 6wot-a1-m1-cD 4197 49 0.2167 0.0031 0.2653 5.1 6wot-a1-m1-cB_6wot-a1-m1-cD, 6wot-a1-m1-cC_6wot-a1-m1-cD
15 6wot-a1-m1-cC 4197 49 0.2167 0.0031 0.2653 5.1 6wot-a1-m1-cC_6wot-a1-m1-cD
16 6wot-a1-m1-cB 4197 49 0.2167 0.0031 0.2653 5.1 6wot-a1-m1-cB_6wot-a1-m1-cD
17 7t64-a1-m1-cD 4247 49 0.2167 0.0031 0.2653 5.1 7t64-a1-m1-cC_7t64-a1-m1-cD
18 7t64-a1-m1-cC 4247 49 0.2167 0.0031 0.2653 5.1 7t64-a1-m1-cC_7t64-a1-m1-cD
19 7m6l-a1-m1-cI 4299 49 0.2167 0.0030 0.2653 5.1 7m6l-a1-m1-cG_7m6l-a1-m1-cI
20 7m6l-a1-m1-cG 4299 49 0.2167 0.0030 0.2653 5.1 7m6l-a1-m1-cG_7m6l-a1-m1-cI
21 7m6a-a1-m1-cI 4306 49 0.2167 0.0030 0.2653 5.1 7m6a-a1-m1-cG_7m6a-a1-m1-cI
22 7m6a-a1-m1-cG 4306 49 0.2167 0.0030 0.2653 5.1 7m6a-a1-m1-cG_7m6a-a1-m1-cI
23 8duj-a1-m1-cG 3933 49 0.2167 0.0033 0.2653 5.2 8duj-a1-m1-cA_8duj-a1-m1-cG
24 3j8h-a1-m1-cG 3660 49 0.2167 0.0036 0.2653 5.3 3j8h-a1-m1-cE_3j8h-a1-m1-cG
25 3j8h-a1-m1-cE 3660 49 0.2167 0.0036 0.2653 5.3 3j8h-a1-m1-cE_3j8h-a1-m1-cG
26 7oy0-a1-m2-cA 462 43 0.2333 0.0303 0.3256 5.5 7oy0-a1-m1-cA_7oy0-a1-m2-cA
27 7oy0-a1-m1-cA 462 43 0.2333 0.0303 0.3256 5.5 7oy0-a1-m1-cA_7oy0-a1-m2-cA
28 6x34-a1-m1-cH 3715 49 0.2167 0.0035 0.2653 7.3 6x34-a1-m1-cF_6x34-a1-m1-cH
29 6x34-a1-m1-cF 3715 49 0.2167 0.0035 0.2653 7.3 6x34-a1-m1-cF_6x34-a1-m1-cH
30 6w1n-a1-m1-cH 3719 49 0.2167 0.0035 0.2653 7.3 6w1n-a1-m1-cF_6w1n-a1-m1-cH
31 6w1n-a1-m1-cF 3719 49 0.2167 0.0035 0.2653 7.3 6w1n-a1-m1-cF_6w1n-a1-m1-cH
32 6x35-a1-m1-cK 3801 49 0.2167 0.0034 0.2653 7.3 6x35-a1-m1-cH_6x35-a1-m1-cK
33 6x35-a1-m1-cH 3801 49 0.2167 0.0034 0.2653 7.3 6x35-a1-m1-cH_6x35-a1-m1-cK

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Reference:
Jacob Schwartz et al.

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