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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
DLPLPPGWSVDWTMRGRKYYIDHNTNTTHWSHPLEREGLPPGWERVESSEFGTYYVDHTN
KRAQYRHPCAPSVPPPYVAPPSYEG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7bqg-a1-m2-cA 85 85 1.0000 1.0000 1.0000 1.08e-59 7bqg-a1-m1-cA_7bqg-a1-m2-cA
2 7bqg-a1-m1-cA 85 85 1.0000 1.0000 1.0000 1.08e-59 7bqg-a1-m1-cA_7bqg-a1-m2-cA
3 7bqf-a1-m2-cA 84 74 0.8706 0.8810 1.0000 1.70e-51 7bqf-a1-m1-cA_7bqf-a1-m2-cA
4 7bqf-a1-m1-cA 84 74 0.8706 0.8810 1.0000 1.70e-51 7bqf-a1-m1-cA_7bqf-a1-m2-cA
5 2dwv-a1-m1-cB 49 42 0.4588 0.7959 0.9286 4.29e-23 2dwv-a1-m1-cA_2dwv-a1-m1-cB
6 2dwv-a1-m1-cA 49 42 0.4588 0.7959 0.9286 4.29e-23 2dwv-a1-m1-cA_2dwv-a1-m1-cB
7 5cq2-a1-m4-cA 76 67 0.3176 0.3553 0.4030 1.34e-10 5cq2-a1-m1-cA_5cq2-a1-m4-cA, 5cq2-a1-m2-cA_5cq2-a1-m4-cA, 5cq2-a1-m3-cA_5cq2-a1-m4-cA
8 5cq2-a1-m4-cA 76 38 0.1647 0.1842 0.3684 0.014 5cq2-a1-m1-cA_5cq2-a1-m4-cA, 5cq2-a1-m2-cA_5cq2-a1-m4-cA, 5cq2-a1-m3-cA_5cq2-a1-m4-cA
9 5cq2-a1-m3-cA 76 67 0.3176 0.3553 0.4030 1.34e-10 5cq2-a1-m3-cA_5cq2-a1-m4-cA
10 5cq2-a1-m3-cA 76 38 0.1647 0.1842 0.3684 0.014 5cq2-a1-m3-cA_5cq2-a1-m4-cA
11 5cq2-a1-m2-cA 76 67 0.3176 0.3553 0.4030 1.34e-10 5cq2-a1-m2-cA_5cq2-a1-m4-cA
12 5cq2-a1-m2-cA 76 38 0.1647 0.1842 0.3684 0.014 5cq2-a1-m2-cA_5cq2-a1-m4-cA
13 5cq2-a1-m1-cA 76 67 0.3176 0.3553 0.4030 1.34e-10 5cq2-a1-m1-cA_5cq2-a1-m4-cA
14 5cq2-a1-m1-cA 76 38 0.1647 0.1842 0.3684 0.014 5cq2-a1-m1-cA_5cq2-a1-m4-cA
15 5dws-a1-m1-cA 37 31 0.1765 0.4054 0.4839 7.52e-05 5dws-a1-m1-cE_5dws-a1-m1-cA
16 5dws-a1-m1-cA 37 30 0.1412 0.3243 0.4000 0.038 5dws-a1-m1-cE_5dws-a1-m1-cA
17 5dws-a1-m1-cE 35 31 0.1765 0.4286 0.4839 7.75e-05 5dws-a1-m1-cE_5dws-a1-m1-cA
18 5dws-a1-m1-cE 35 30 0.1412 0.3429 0.4000 0.039 5dws-a1-m1-cE_5dws-a1-m1-cA
19 1pin-a1-m2-cA 153 32 0.1647 0.0915 0.4375 0.035 1pin-a1-m1-cA_1pin-a1-m2-cA
20 1pin-a1-m2-cA 153 31 0.1529 0.0850 0.4194 2.1 1pin-a1-m1-cA_1pin-a1-m2-cA
21 1pin-a1-m1-cA 153 32 0.1647 0.0915 0.4375 0.035 1pin-a1-m1-cA_1pin-a1-m2-cA
22 1pin-a1-m1-cA 153 31 0.1529 0.0850 0.4194 2.1 1pin-a1-m1-cA_1pin-a1-m2-cA
23 4xpq-a1-m2-cA 670 46 0.1765 0.0224 0.3261 0.43 4xpq-a1-m1-cA_4xpq-a1-m2-cA
24 4xpq-a1-m1-cA 670 46 0.1765 0.0224 0.3261 0.43 4xpq-a1-m1-cA_4xpq-a1-m2-cA
25 6ust-a2-m1-cB 463 57 0.2235 0.0410 0.3333 0.90 6ust-a2-m1-cB_6ust-a2-m2-cC
26 6ust-a2-m2-cC 464 57 0.2235 0.0409 0.3333 0.92 6ust-a2-m1-cB_6ust-a2-m2-cC
27 5l2l-a1-m1-cA 72 23 0.1294 0.1528 0.4783 2.4 5l2l-a1-m1-cA_5l2l-a1-m1-cB
28 5xza-a1-m2-cA 322 38 0.1647 0.0435 0.3684 2.7 5xza-a1-m1-cA_5xza-a1-m2-cA
29 5xza-a1-m1-cA 322 38 0.1647 0.0435 0.3684 2.7 5xza-a1-m1-cA_5xza-a1-m2-cA
30 5l2l-a1-m1-cB 74 23 0.1294 0.1486 0.4783 2.7 5l2l-a1-m1-cA_5l2l-a1-m1-cB
31 3e9m-a2-m2-cC 313 68 0.2235 0.0607 0.2794 3.1 3e9m-a2-m1-cB_3e9m-a2-m2-cC
32 3e9m-a2-m1-cB 313 68 0.2235 0.0607 0.2794 3.1 3e9m-a2-m1-cB_3e9m-a2-m2-cC
33 1i2w-a1-m1-cB 256 45 0.1765 0.0586 0.3333 5.3 1i2w-a1-m1-cA_1i2w-a1-m1-cB
34 1i2w-a1-m1-cA 255 39 0.1765 0.0588 0.3846 6.7 1i2w-a1-m1-cA_1i2w-a1-m1-cB
35 4pdx-a1-m1-cB 603 29 0.1059 0.0149 0.3103 9.6 4pdx-a1-m1-cB_4pdx-a1-m1-cA
36 4pdx-a1-m1-cA 606 29 0.1059 0.0149 0.3103 9.6 4pdx-a1-m1-cB_4pdx-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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