Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=93)
DLQHRLDEAEQIALGGQLQLEARVRELENELEAEQRNAESVGRSERRIELTYQTEDLEER
DFYFGLRNIELICQENEGENDPVLQRIVDILYA

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 4xa6-a2-m1-cC 100 93 1.0000 0.9300 1.0000 6.00e-61 4xa6-a2-m1-cD_4xa6-a2-m1-cC
2 4xa6-a2-m1-cD 93 93 1.0000 1.0000 1.0000 6.57e-61 4xa6-a2-m1-cD_4xa6-a2-m1-cC
3 4xa6-a1-m1-cA 149 93 1.0000 0.6242 1.0000 1.51e-60 4xa6-a1-m1-cB_4xa6-a1-m1-cA
4 4xa6-a1-m1-cB 146 92 0.9785 0.6233 0.9891 1.40e-57 4xa6-a1-m1-cB_4xa6-a1-m1-cA
5 6pf2-a1-m1-cB 150 86 0.5806 0.3600 0.6279 5.65e-24 6pf2-a1-m1-cB_6pf2-a1-m1-cA
6 6pf2-a1-m1-cA 157 86 0.5806 0.3439 0.6279 8.55e-24 6pf2-a1-m1-cB_6pf2-a1-m1-cA
7 5jvu-a1-m1-cB 69 66 0.4839 0.6522 0.6818 1.09e-20 5jvu-a1-m1-cB_5jvu-a1-m1-cA
8 5jvu-a1-m1-cA 76 66 0.4839 0.5921 0.6818 1.92e-20 5jvu-a1-m1-cB_5jvu-a1-m1-cA
9 4xa1-a1-m1-cA 153 56 0.4409 0.2680 0.7321 1.01e-19 4xa1-a1-m1-cA_4xa1-a1-m1-cB
10 4xa1-a1-m1-cB 155 56 0.4409 0.2645 0.7321 1.04e-19 4xa1-a1-m1-cA_4xa1-a1-m1-cB
11 6pfp-a2-m1-cD 156 49 0.4409 0.2628 0.8367 1.74e-19 6pfp-a2-m1-cC_6pfp-a2-m1-cD
12 6pfp-a2-m1-cC 156 49 0.4409 0.2628 0.8367 1.74e-19 6pfp-a2-m1-cC_6pfp-a2-m1-cD
13 5jvm-a1-m1-cB 79 42 0.4194 0.4937 0.9286 5.53e-19 5jvm-a1-m1-cB_5jvm-a1-m1-cA
14 5jvm-a1-m1-cA 82 42 0.4194 0.4756 0.9286 6.46e-19 5jvm-a1-m1-cB_5jvm-a1-m1-cA
15 5jv3-a2-m1-cD 68 37 0.3763 0.5147 0.9459 9.15e-19 5jv3-a2-m1-cC_5jv3-a2-m1-cD
16 5jvp-a2-m3-cB 88 37 0.3763 0.3977 0.9459 2.00e-18 5jvp-a2-m1-cB_5jvp-a2-m3-cB
17 5jvp-a2-m1-cB 88 37 0.3763 0.3977 0.9459 2.00e-18 5jvp-a2-m1-cB_5jvp-a2-m3-cB
18 3mtu-a2-m1-cB 65 36 0.3548 0.5077 0.9167 6.14e-18 3mtu-a2-m1-cB_3mtu-a2-m1-cA, 3mtu-a2-m1-cD_3mtu-a2-m1-cB
19 3mtu-a2-m1-cD 64 36 0.3548 0.5156 0.9167 6.68e-18 3mtu-a2-m1-cD_3mtu-a2-m1-cB
20 5jv3-a2-m1-cC 64 36 0.3656 0.5312 0.9444 7.13e-18 5jv3-a2-m1-cC_5jv3-a2-m1-cD
21 3mtu-a2-m1-cA 72 36 0.3548 0.4583 0.9167 1.20e-17 3mtu-a2-m1-cB_3mtu-a2-m1-cA
22 6yf5-a2-m1-cC 87 41 0.3871 0.4138 0.8780 3.11e-17 6yf5-a2-m1-cD_6yf5-a2-m1-cC
23 6yf5-a2-m1-cD 82 41 0.3871 0.4390 0.8780 3.44e-17 6yf5-a2-m1-cD_6yf5-a2-m1-cC
24 4xa3-a1-m1-cA 142 78 0.3978 0.2606 0.4744 7.18e-13 4xa3-a1-m1-cA_4xa3-a1-m1-cB
25 4xa3-a1-m1-cB 142 77 0.3871 0.2535 0.4675 9.57e-12 4xa3-a1-m1-cA_4xa3-a1-m1-cB
26 5jx1-a1-m2-cA 64 35 0.3011 0.4375 0.8000 5.17e-10 5jx1-a1-m1-cA_5jx1-a1-m2-cA
27 5jx1-a1-m1-cA 64 35 0.3011 0.4375 0.8000 5.17e-10 5jx1-a1-m1-cA_5jx1-a1-m2-cA
28 7kog-a1-m1-cB 1077 65 0.3656 0.0316 0.5231 3.49e-06 7kog-a1-m1-cA_7kog-a1-m1-cB
29 7kog-a1-m1-cA 1077 65 0.3656 0.0316 0.5231 3.49e-06 7kog-a1-m1-cA_7kog-a1-m1-cB
30 3sal-a2-m7-cB 394 50 0.1720 0.0406 0.3200 0.85 3sal-a2-m7-cB_3sal-a2-m5-cB
31 3sal-a2-m5-cB 394 50 0.1720 0.0406 0.3200 0.85 3sal-a2-m7-cB_3sal-a2-m5-cB
32 4ffa-a1-m1-cC 234 42 0.1720 0.0684 0.3810 2.6 4ffa-a1-m1-cD_4ffa-a1-m1-cC
33 4cvy-a2-m1-cB 240 42 0.1720 0.0667 0.3810 2.7 4cvy-a2-m1-cD_4cvy-a2-m1-cB
34 4dmg-a1-m1-cB 385 30 0.1505 0.0364 0.4667 3.0 4dmg-a1-m1-cA_4dmg-a1-m1-cB
35 4dmg-a1-m1-cA 385 30 0.1505 0.0364 0.4667 3.0 4dmg-a1-m1-cA_4dmg-a1-m1-cB
36 7ka0-a1-m1-cE 835 58 0.1828 0.0204 0.2931 3.5 7ka0-a1-m1-cB_7ka0-a1-m1-cE
37 7ka0-a1-m1-cB 835 58 0.1828 0.0204 0.2931 3.5 7ka0-a1-m1-cB_7ka0-a1-m1-cE
38 5tby-a1-m1-cA 954 63 0.1935 0.0189 0.2857 5.1 5tby-a1-m1-cB_5tby-a1-m1-cA
39 5tby-a1-m1-cB 950 63 0.1935 0.0189 0.2857 5.7 5tby-a1-m1-cB_5tby-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600