Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=89)
DLQRLKFIRHARQLGFSLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQSM
QRSLQRLNDACCGTAHSSVYCSILEALEQ

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 1q0a-a4-m3-cB 89 89 1.0000 1.0000 1.0000 5.16e-60 1q0a-a4-m1-cB_1q0a-a4-m3-cB
2 1q0a-a4-m1-cB 89 89 1.0000 1.0000 1.0000 5.16e-60 1q0a-a4-m1-cB_1q0a-a4-m3-cB
3 1q0a-a2-m1-cB 89 89 1.0000 1.0000 1.0000 5.16e-60 1q0a-a2-m1-cB_1q0a-a2-m1-cA
4 1q0a-a2-m1-cA 91 89 1.0000 0.9780 1.0000 5.85e-60 1q0a-a2-m1-cB_1q0a-a2-m1-cA
5 1q06-a1-m1-cB 126 86 0.3820 0.2698 0.3953 2.67e-11 1q06-a1-m1-cA_1q06-a1-m1-cB
6 1q06-a1-m1-cA 122 86 0.3708 0.2705 0.3837 8.30e-11 1q06-a1-m1-cA_1q06-a1-m1-cB
7 5gpe-a4-m1-cG 129 86 0.3596 0.2481 0.3721 8.37e-10 5gpe-a4-m1-cH_5gpe-a4-m1-cG
8 5gpe-a4-m1-cH 128 86 0.3596 0.2500 0.3721 1.49e-09 5gpe-a4-m1-cH_5gpe-a4-m1-cG
9 5crl-a1-m1-cB 119 88 0.3258 0.2437 0.3295 7.15e-09 5crl-a1-m1-cA_5crl-a1-m1-cB
10 6jni-a2-m1-cC 128 72 0.2921 0.2031 0.3611 8.97e-09 6jni-a2-m1-cC_6jni-a2-m1-cD
11 5crl-a1-m1-cA 114 71 0.2921 0.2281 0.3662 1.10e-08 5crl-a1-m1-cA_5crl-a1-m1-cB
12 6jni-a2-m1-cD 145 87 0.3371 0.2069 0.3448 2.73e-08 6jni-a2-m1-cC_6jni-a2-m1-cD
13 4ua1-a1-m1-cA 124 87 0.2697 0.1935 0.2759 1.91e-07 4ua1-a1-m1-cA_4ua1-a1-m1-cB
14 4ua1-a1-m1-cB 125 87 0.2697 0.1920 0.2759 2.03e-07 4ua1-a1-m1-cA_4ua1-a1-m1-cB
15 6jgw-a1-m1-cA 125 87 0.3258 0.2320 0.3333 1.04e-06 6jgw-a1-m1-cB_6jgw-a1-m1-cA
16 4wls-a1-m1-cB 108 58 0.2584 0.2130 0.3966 2.36e-06 4wls-a1-m1-cA_4wls-a1-m1-cB
17 4wls-a1-m1-cA 108 58 0.2584 0.2130 0.3966 2.36e-06 4wls-a1-m1-cA_4wls-a1-m1-cB
18 6jgw-a1-m1-cB 116 70 0.2697 0.2069 0.3429 1.10e-05 6jgw-a1-m1-cB_6jgw-a1-m1-cA
19 2dxq-a1-m1-cA 145 39 0.1685 0.1034 0.3846 0.076 2dxq-a1-m1-cB_2dxq-a1-m1-cA
20 2dxq-a1-m1-cB 142 39 0.1685 0.1056 0.3846 0.077 2dxq-a1-m1-cB_2dxq-a1-m1-cA
21 1r8d-a1-m1-cA 109 64 0.2135 0.1743 0.2969 0.87 1r8d-a1-m1-cB_1r8d-a1-m1-cA
22 3gp4-a2-m3-cB 130 68 0.2247 0.1538 0.2941 0.94 3gp4-a2-m2-cB_3gp4-a2-m3-cB, 3gp4-a2-m3-cB_3gp4-a2-m3-cA
23 3gp4-a2-m2-cB 130 68 0.2247 0.1538 0.2941 0.94 3gp4-a2-m2-cB_3gp4-a2-m3-cB
24 1r8d-a1-m1-cB 107 64 0.2135 0.1776 0.2969 0.94 1r8d-a1-m1-cB_1r8d-a1-m1-cA
25 3gp4-a2-m3-cA 132 68 0.2247 0.1515 0.2941 1.0 3gp4-a2-m3-cB_3gp4-a2-m3-cA
26 5cqs-a2-m1-cC 307 46 0.1910 0.0554 0.3696 2.5 5cqs-a2-m1-cC_5cqs-a2-m1-cB
27 2vz4-a1-m2-cA 100 65 0.2022 0.1800 0.2769 5.5 2vz4-a1-m1-cA_2vz4-a1-m2-cA
28 2vz4-a1-m1-cA 100 65 0.2022 0.1800 0.2769 5.5 2vz4-a1-m1-cA_2vz4-a1-m2-cA
29 1r74-a1-m2-cA 275 74 0.2022 0.0655 0.2432 7.8 1r74-a1-m2-cA_1r74-a1-m2-cB
30 7u9g-a1-m1-cC 389 42 0.1685 0.0386 0.3571 8.1 7u9g-a1-m1-cB_7u9g-a1-m1-cC
31 7u9g-a1-m1-cB 389 42 0.1685 0.0386 0.3571 8.1 7u9g-a1-m1-cB_7u9g-a1-m1-cC
32 3gx1-a1-m1-cA 118 32 0.1348 0.1017 0.3750 8.2 3gx1-a1-m1-cA_3gx1-a1-m1-cB
33 7e5a-a1-m1-cA 465 82 0.2697 0.0516 0.2927 8.4 7e5a-a1-m1-cA_7e5a-a1-m1-cB
34 1r74-a1-m2-cB 279 74 0.2022 0.0645 0.2432 8.5 1r74-a1-m1-cB_1r74-a1-m2-cB, 1r74-a1-m2-cA_1r74-a1-m2-cB
35 1r74-a1-m1-cB 279 74 0.2022 0.0645 0.2432 8.5 1r74-a1-m1-cB_1r74-a1-m2-cB
36 3gx1-a1-m1-cB 118 32 0.1348 0.1017 0.3750 8.7 3gx1-a1-m1-cA_3gx1-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600