Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=44)
DLSFTGLTDEQAQELHAVYMSGLSAFIAVAVLAHLAVMIWRPWF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7yml-a1-m1-cJ 44 44 1.0000 1.0000 1.0000 7.47e-27 7yml-a1-m1-cN_7yml-a1-m1-cJ
2 7yml-a1-m1-cN 43 43 0.9773 1.0000 1.0000 7.12e-26 7yml-a1-m1-cN_7yml-a1-m1-cJ
3 7vy3-a1-m1-cG 45 44 0.7955 0.7778 0.7955 9.49e-21 7vy3-a1-m1-cJ_7vy3-a1-m1-cG
4 4v9g-a1-m1-cBO 48 44 0.7955 0.7292 0.7955 9.80e-21 4v9g-a1-m1-cB9_4v9g-a1-m1-cBO
5 4v9g-a1-m1-cBK 48 44 0.7955 0.7292 0.7955 9.80e-21 4v9g-a1-m1-cB9_4v9g-a1-m1-cBK
6 4v9g-a1-m1-cBE 48 44 0.7955 0.7292 0.7955 9.80e-21 4v9g-a1-m1-cB8_4v9g-a1-m1-cBE
7 4v9g-a1-m1-cB9 48 44 0.7955 0.7292 0.7955 9.80e-21 4v9g-a1-m1-cB9_4v9g-a1-m1-cBK, 4v9g-a1-m1-cB9_4v9g-a1-m1-cBO
8 4v9g-a1-m1-cB8 48 44 0.7955 0.7292 0.7955 9.80e-21 4v9g-a1-m1-cB8_4v9g-a1-m1-cBE
9 7vy3-a1-m1-cJ 43 43 0.7727 0.7907 0.7907 9.57e-20 7vy3-a1-m1-cJ_7vy3-a1-m1-cG
10 6et5-a1-m1-cu 55 42 0.3864 0.3091 0.4048 2.79e-07 6et5-a1-m1-cr_6et5-a1-m1-cu
11 6et5-a1-m1-cr 55 42 0.3864 0.3091 0.4048 2.79e-07 6et5-a1-m1-cr_6et5-a1-m1-cu
12 2v2h-a1-m1-cC 241 32 0.2955 0.0539 0.4062 1.4 2v2h-a1-m1-cB_2v2h-a1-m1-cC
13 2v2h-a1-m1-cB 241 32 0.2955 0.0539 0.4062 1.4 2v2h-a1-m1-cB_2v2h-a1-m1-cC
14 2v2d-a1-m3-cA 241 32 0.2955 0.0539 0.4062 1.4 2v2d-a1-m2-cA_2v2d-a1-m3-cA
15 2v2d-a1-m2-cA 241 32 0.2955 0.0539 0.4062 1.4 2v2d-a1-m2-cA_2v2d-a1-m3-cA
16 2v0t-a3-m1-cD 249 32 0.2955 0.0522 0.4062 1.6 2v0t-a3-m1-cF_2v0t-a3-m1-cD
17 2v0t-a3-m1-cF 242 32 0.2955 0.0537 0.4062 1.7 2v0t-a3-m1-cF_2v0t-a3-m1-cD
18 4e2l-a1-m1-cB 240 26 0.2500 0.0458 0.4231 3.0 4e2l-a1-m1-cA_4e2l-a1-m1-cB
19 4e2l-a1-m1-cA 240 26 0.2500 0.0458 0.4231 3.0 4e2l-a1-m1-cA_4e2l-a1-m1-cB
20 6zur-a1-m1-cB 398 22 0.2500 0.0276 0.5000 5.0 6zur-a1-m1-cA_6zur-a1-m1-cB
21 6zur-a1-m1-cA 398 22 0.2500 0.0276 0.5000 5.0 6zur-a1-m1-cA_6zur-a1-m1-cB
22 7b5h-a1-m1-cFH 1227 29 0.2500 0.0090 0.3793 5.1 7b5h-a1-m1-cEH_7b5h-a1-m1-cFH
23 7b5h-a1-m1-cEH 1227 29 0.2500 0.0090 0.3793 5.1 7b5h-a1-m1-cEH_7b5h-a1-m1-cFH
24 1ml1-a2-m1-cG 241 31 0.2727 0.0498 0.3871 5.1 1ml1-a2-m1-cE_1ml1-a2-m1-cG
25 1ml1-a2-m1-cE 241 31 0.2727 0.0498 0.3871 5.1 1ml1-a2-m1-cE_1ml1-a2-m1-cG
26 1mss-a1-m1-cB 242 31 0.2727 0.0496 0.3871 5.7 1mss-a1-m1-cA_1mss-a1-m1-cB
27 1mss-a1-m1-cA 242 31 0.2727 0.0496 0.3871 5.7 1mss-a1-m1-cA_1mss-a1-m1-cB
28 1dkw-a1-m1-cA 238 31 0.2727 0.0504 0.3871 6.3 1dkw-a1-m1-cB_1dkw-a1-m1-cA
29 1dkw-a1-m1-cB 234 31 0.2727 0.0513 0.3871 6.6 1dkw-a1-m1-cB_1dkw-a1-m1-cA
30 3vny-a3-m4-cA 466 25 0.2500 0.0236 0.4400 7.4 3vny-a3-m1-cA_3vny-a3-m4-cA, 3vny-a3-m3-cA_3vny-a3-m4-cA
31 3vny-a3-m3-cA 466 25 0.2500 0.0236 0.4400 7.4 3vny-a3-m3-cA_3vny-a3-m4-cA
32 3vny-a3-m1-cA 466 25 0.2500 0.0236 0.4400 7.4 3vny-a3-m1-cA_3vny-a3-m4-cA
33 1usp-a1-m1-cA 135 16 0.2045 0.0667 0.5625 7.9 1usp-a1-m1-cB_1usp-a1-m1-cA
34 1cwp-a1-m10-cA 149 42 0.3182 0.0940 0.3333 9.4 1cwp-a1-m10-cA_1cwp-a1-m9-cB
35 1usp-a1-m1-cB 132 16 0.2045 0.0682 0.5625 9.7 1usp-a1-m1-cB_1usp-a1-m1-cA
36 1za7-a1-m9-cC 165 42 0.3182 0.0848 0.3333 9.8 1za7-a1-m55-cB_1za7-a1-m9-cC, 1za7-a1-m9-cB_1za7-a1-m9-cC
37 1za7-a1-m9-cB 165 42 0.3182 0.0848 0.3333 9.8 1za7-a1-m9-cB_1za7-a1-m9-cC
38 1za7-a1-m55-cB 165 42 0.3182 0.0848 0.3333 9.8 1za7-a1-m55-cB_1za7-a1-m9-cC
39 1cwp-a1-m9-cB 164 42 0.3182 0.0854 0.3333 9.9 1cwp-a1-m10-cA_1cwp-a1-m9-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600