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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=26)
DMRPEIWIAQELRRIGDEFNAYYARR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6x8o-a1-m1-cD 26 26 1.0000 1.0000 1.0000 1.67e-13 6x8o-a1-m1-cA_6x8o-a1-m1-cD, 6x8o-a1-m1-cB_6x8o-a1-m1-cD
2 6x8o-a1-m1-cC 26 26 1.0000 1.0000 1.0000 1.67e-13 6x8o-a1-m1-cA_6x8o-a1-m1-cC
3 6x8o-a1-m1-cB 26 26 1.0000 1.0000 1.0000 1.67e-13 6x8o-a1-m1-cB_6x8o-a1-m1-cD
4 6x8o-a1-m1-cA 26 26 1.0000 1.0000 1.0000 1.67e-13 6x8o-a1-m1-cA_6x8o-a1-m1-cC, 6x8o-a1-m1-cA_6x8o-a1-m1-cD
5 5mlv-a1-m1-cR 430 19 0.3077 0.0186 0.4211 2.4 5mlv-a1-m1-cF_5mlv-a1-m1-cR
6 5mlv-a1-m1-cF 430 19 0.3077 0.0186 0.4211 2.4 5mlv-a1-m1-cF_5mlv-a1-m1-cR
7 6w1i-a1-m1-cD 191 14 0.3077 0.0419 0.5714 5.1 6w1i-a1-m1-cC_6w1i-a1-m1-cD
8 6w1i-a1-m1-cB 191 14 0.3077 0.0419 0.5714 5.1 6w1i-a1-m1-cC_6w1i-a1-m1-cB
9 6w1i-a1-m1-cA 190 14 0.3077 0.0421 0.5714 5.1 6w1i-a1-m1-cC_6w1i-a1-m1-cA
10 6w1i-a1-m1-cC 189 14 0.3077 0.0423 0.5714 5.1 6w1i-a1-m1-cC_6w1i-a1-m1-cA, 6w1i-a1-m1-cC_6w1i-a1-m1-cB, 6w1i-a1-m1-cC_6w1i-a1-m1-cD
11 4cim-a2-m1-cA 146 18 0.3462 0.0616 0.5000 8.7 4cim-a2-m1-cP_4cim-a2-m1-cA

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Reference:
Jacob Schwartz et al.

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