Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
DNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFKYLYFIKGLN
NLNRGMVLGSLAAT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8dqu-a1-m6-cC 78 74 1.0000 0.9487 1.0000 1.38e-50 8dqu-a1-m6-cF_8dqu-a1-m6-cC
2 8dqu-a1-m6-cF 74 74 1.0000 1.0000 1.0000 1.65e-50 8dqu-a1-m6-cF_8dqu-a1-m6-cC
3 2j98-a1-m1-cB 102 80 0.4459 0.3235 0.4125 5.01e-12 2j98-a1-m1-cB_2j98-a1-m1-cA
4 2j98-a1-m1-cA 106 80 0.4459 0.3113 0.4125 5.48e-12 2j98-a1-m1-cB_2j98-a1-m1-cA
5 2j97-a1-m2-cA 98 70 0.4054 0.3061 0.4286 9.07e-12 2j97-a1-m1-cA_2j97-a1-m2-cA
6 2j97-a1-m1-cA 98 70 0.4054 0.3061 0.4286 9.07e-12 2j97-a1-m1-cA_2j97-a1-m2-cA
7 5c94-a1-m2-cA 116 78 0.4054 0.2586 0.3846 3.89e-11 5c94-a1-m1-cA_5c94-a1-m2-cA
8 5c94-a1-m1-cA 116 78 0.4054 0.2586 0.3846 3.89e-11 5c94-a1-m1-cA_5c94-a1-m2-cA
9 5hiz-a1-m1-cB 96 80 0.4865 0.3750 0.4500 2.13e-10 5hiz-a1-m1-cA_5hiz-a1-m1-cB
10 5hiz-a1-m1-cA 96 80 0.4865 0.3750 0.4500 2.13e-10 5hiz-a1-m1-cA_5hiz-a1-m1-cB
11 5ym6-a2-m1-cC 99 74 0.3649 0.2727 0.3649 5.10e-09 5ym6-a2-m1-cD_5ym6-a2-m1-cC
12 5ym6-a2-m1-cD 95 72 0.3649 0.2842 0.3750 1.04e-07 5ym6-a2-m1-cD_5ym6-a2-m1-cC
13 2z6e-a2-m1-cC 379 31 0.1351 0.0264 0.3226 0.77 2z6e-a2-m1-cC_2z6e-a2-m1-cD
14 2z6e-a2-m1-cD 390 31 0.1351 0.0256 0.3226 0.77 2z6e-a2-m1-cC_2z6e-a2-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600