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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=43)
DNEETLKQRLTNLEKKITNVTTKFEQIEKAAKRNDEVLFRLEN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3vop-a1-m1-cC 43 43 1.0000 1.0000 1.0000 9.79e-24 3vop-a1-m1-cA_3vop-a1-m1-cC, 3vop-a1-m1-cB_3vop-a1-m1-cC
2 3vop-a1-m1-cB 40 40 0.9302 1.0000 1.0000 1.86e-21 3vop-a1-m1-cA_3vop-a1-m1-cB, 3vop-a1-m1-cB_3vop-a1-m1-cC
3 3vop-a1-m1-cA 40 40 0.9302 1.0000 1.0000 1.86e-21 3vop-a1-m1-cA_3vop-a1-m1-cB, 3vop-a1-m1-cA_3vop-a1-m1-cC
4 1nfp-a1-m2-cA 228 42 0.3256 0.0614 0.3333 1.4 1nfp-a1-m1-cA_1nfp-a1-m2-cA
5 1nfp-a1-m1-cA 228 42 0.3256 0.0614 0.3333 1.4 1nfp-a1-m1-cA_1nfp-a1-m2-cA
6 6dnf-a1-m1-cD 225 33 0.2791 0.0533 0.3636 2.0 6dnf-a1-m1-cA_6dnf-a1-m1-cD, 6dnf-a1-m1-cC_6dnf-a1-m1-cD
7 6dnf-a1-m1-cC 225 33 0.2791 0.0533 0.3636 2.0 6dnf-a1-m1-cC_6dnf-a1-m1-cD
8 6dnf-a1-m1-cA 225 33 0.2791 0.0533 0.3636 2.0 6dnf-a1-m1-cA_6dnf-a1-m1-cD
9 4rsz-a7-m3-cF 104 37 0.3023 0.1250 0.3514 7.0 4rsz-a7-m3-cD_4rsz-a7-m3-cF
10 4rsz-a7-m3-cD 104 37 0.3023 0.1250 0.3514 7.0 4rsz-a7-m1-cA_4rsz-a7-m3-cD, 4rsz-a7-m3-cD_4rsz-a7-m3-cF
11 4rsz-a7-m1-cA 104 37 0.3023 0.1250 0.3514 7.0 4rsz-a7-m1-cA_4rsz-a7-m3-cD
12 3wc8-a1-m2-cA 104 37 0.3023 0.1250 0.3514 7.0 3wc8-a1-m1-cA_3wc8-a1-m2-cA
13 3wc8-a1-m1-cA 104 37 0.3023 0.1250 0.3514 7.0 3wc8-a1-m1-cA_3wc8-a1-m2-cA
14 3nbt-a1-m1-cF 104 37 0.3023 0.1250 0.3514 7.0 3nbt-a1-m1-cE_3nbt-a1-m1-cF
15 3nbt-a1-m1-cE 104 37 0.3023 0.1250 0.3514 7.0 3nbt-a1-m1-cE_3nbt-a1-m1-cF
16 6q5q-a1-m4-cA 32 28 0.2093 0.2812 0.3214 9.3 6q5q-a1-m1-cA_6q5q-a1-m4-cA, 6q5q-a1-m2-cA_6q5q-a1-m4-cA
17 6q5q-a1-m2-cA 32 28 0.2093 0.2812 0.3214 9.3 6q5q-a1-m2-cA_6q5q-a1-m4-cA
18 6q5q-a1-m1-cA 32 28 0.2093 0.2812 0.3214 9.3 6q5q-a1-m1-cA_6q5q-a1-m4-cA

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Reference:
Jacob Schwartz et al.

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